RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ZGRF1Q86YA3 2104 aa12.27□□□□□ -0.45
CTDSP1-201ENST00000273062 TRGV9Q99603 122 aa12.27□□□□□ -0.45
CTDSP1-201ENST00000273062 NDUFA4L2Q9NRX3 87 aa12.27□□□□□ -0.45
CTDSP1-201ENST00000273062 CGB1A6NKQ9 187 aa12.26□□□□□ -0.45
CTDSP1-201ENST00000273062 LGALS1P09382 135 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-201ENST00000273062 FAM57AQ8TBR7 257 aa12.26□□□□□ -0.45
CTDSP1-201ENST00000273062 VCX2Q9H322 139 aa12.26□□□□□ -0.45
CTDSP1-201ENST00000273062 NCBP2LA6PVI3 153 aaKnown RBP12.26□□□□□ -0.45
CTDSP1-201ENST00000273062 UBE2D1P51668 147 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 THAP8Q8NA92 274 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 SRRM5B3KS81 715 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 PSMG4Q5JS54 123 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 Q8NA96 180 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 ODF3Q96PU9 254 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 LINC01587Q99440 93 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 OTORQ9NRC9 128 aa12.25□□□□□ -0.45
CTDSP1-201ENST00000273062 A0A0G2JNJ9 132 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 APELAP0DMC3 54 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 ZCCHC24Q8N2G6 241 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 RNF185Q96GF1 192 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 Q9UFV3 132 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 RPUSD1Q9UJJ7 312 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 M0R3E3 92 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 NRGNQ92686 78 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 TLN1Q9Y490 2541 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 GLRXP35754 106 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 EFNA4P52798 201 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 C17orf58Q2M2W7 97 aa12.24□□□□□ -0.45
CTDSP1-201ENST00000273062 MDFICQ9P1T7 246 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 ATP5LO75964 103 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 CD7P09564 240 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 C15orf53Q8NAA6 179 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 OR11H6Q8NGC7 330 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
CTDSP1-201ENST00000273062 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 IGF2RP11717 2491 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 MRPL23Q16540 153 aaKnown RBP12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 HCP5Q6MZN7 132 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 C21orf62Q9NYP8 219 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 DSCAMO60469 2012 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 CD40P25942 277 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 C5orf47Q569G3 176 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 TMEM78Q5T7P6 136 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 AAMDCQ9H7C9 122 aa12.22□□□□□ -0.45
CTDSP1-201ENST00000273062 IGLV3-9A0A075B6K5 115 aa12.21□□□□□ -0.45
CTDSP1-201ENST00000273062 C9JAW5 83 aa12.21□□□□□ -0.45
CTDSP1-201ENST00000273062 SLC25A20O43772 301 aa12.21□□□□□ -0.45
CTDSP1-201ENST00000273062 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
CTDSP1-201ENST00000273062 LINC01546A6NGU7 62 aa12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 SH2D1AO60880 128 aa12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 IGHV1-46P01743 117 aa12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 ASIPP42127 132 aa12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 ATP5IP56385 69 aaPredicted RBP12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.46
CTDSP1-201ENST00000273062 ZZEF1O43149 2961 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 PTPRQQ9UMZ3 2332 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 LHBP01229 141 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 NTN5Q8WTR8 489 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 PKDREJQ9NTG1 2253 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 LYZP61626 148 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 Q6Q795 121 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 Q8N1Y9 231 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
CTDSP1-201ENST00000273062 TEX49A0A1B0GTD5 131 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 TNFAIP6P98066 277 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 MZT1Q08AG7 82 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 GFRALQ6UXV0 394 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 SPXQ9BT56 116 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 ONECUT1Q9UBC0 465 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 LINC01619G3V211 115 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 SCGB1C2P0DMR2 95 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 RPL7P18124 248 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 ZNF575Q86XF7 245 aa12.19□□□□□ -0.46
CTDSP1-201ENST00000273062 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 CGB3P0DN86 165 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 CGB7P0DN87 165 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 CCL8P80075 99 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 TMEM155Q4W5P6 130 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 OR10J6PQ8NGY7 276 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 TPSG1Q9NRR2 321 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 FAM216BQ8N7L0 139 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 CCL13Q99616 98 aa12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 SLC25A39Q9BZJ4 359 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-201ENST00000273062 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 ZNF815PA8K554 130 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 MRPL20Q9BYC9 149 aaKnown RBP12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 OOSP1A8MZH6 123 aa12.17□□□□□ -0.46
CTDSP1-201ENST00000273062 BSPH1Q075Z2 132 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms