RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 HTN3P15516 51 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 LINC00173Q6ZV60 143 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 SRRM5B3KS81 715 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 CLPSP04118 112 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 IGHV1-8P0DP01 117 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 C6orf226Q5I0X4 101 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 SPATA12Q7Z6I5 190 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 IGHV1-3A0A0C4DH29 117 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 IGKV3D-7A0A0C4DH55 119 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 J3QQQ9 107 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 C5orf64Q2M2E5 130 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 MRPL23Q16540 153 aaKnown RBP5.78□□□□□ -1.48
HERC2-201ENST00000261609 USMG5Q96IX5 58 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 ADAMTS9Q9P2N4 1935 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 F8VRH5 84 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 EFNA2O43921 213 aa5.78□□□□□ -1.48
HERC2-201ENST00000261609 ZNF883P0CG24 379 aa5.77□□□□□ -1.48
HERC2-201ENST00000261609 LINC01545Q5VT33 79 aa5.77□□□□□ -1.48
HERC2-201ENST00000261609 F8WEM9 126 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 THBDP07204 575 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 TEN1Q86WV5 123 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 SPRR3Q9UBC9 169 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 RPL36AP83881 106 aaKnown RBP5.77□□□□□ -1.49
HERC2-201ENST00000261609 RPL36ALQ969Q0 106 aaKnown RBP5.77□□□□□ -1.49
HERC2-201ENST00000261609 SIGLEC9Q9Y336 463 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 IGKV1-6A0A0C4DH72 117 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 C2orf66Q6UXQ4 117 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 FAM223BA6NKX1 122 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 CMC4P56277 68 aaPredicted RBP5.77□□□□□ -1.49
HERC2-201ENST00000261609 FAM223AQ8IWN6 122 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 ATOX1O00244 68 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 TRAV26-2A0A0B4J265 109 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 EPOPA6NHQ4 379 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 K7EMI3 77 aa5.77□□□□□ -1.49
HERC2-201ENST00000261609 FXYD2P54710 66 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 C9orf139Q6ZV77 190 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 C7orf69Q9H7B7 122 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 HIVEP3Q5T1R4 2406 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 TRAV41A0A0B4J266 112 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 IGHV1-18A0A0C4DH31 117 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 hADV29S1A0JD25 119 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 OOSP1A8MZH6 123 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 TRPT1Q86TN4 253 aaKnown RBP5.76□□□□□ -1.49
HERC2-201ENST00000261609 GGNQ86UU5 652 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 TP53TG1Q9Y2A0 90 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 TRBV25-1A0A075B6N4 114 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 CR1LQ2VPA4 569 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 FRMPD3Q5JV73 1810 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 TMEM178BH3BS89 294 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 MINOS1Q5TGZ0 78 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 MINOS1-NBL1R4GNA1 71 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 GAFA1Q96PS6 74 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 HIVEP2P31629 2446 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
HERC2-201ENST00000261609 MUC6Q6W4X9 2439 aa5.76□□□□□ -1.49
HERC2-201ENST00000261609 RNASE6Q93091 150 aaKnown RBP5.75□□□□□ -1.49
HERC2-201ENST00000261609 CLUHP3Q96NS8 147 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 V9GYY9 64 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 Q6ZUT4 128 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 SSC4DQ8WTU2 575 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 BRK1Q8WUW1 75 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 EFNA4P52798 201 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 SETD2Q9BYW2 2564 aaPredicted RBP5.75□□□□□ -1.49
HERC2-201ENST00000261609 C1orf159Q96HA4 380 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 IGHG3P01860 377 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 CFHR1Q03591 330 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 SPANXB1Q9NS25 103 aaPredicted RBP5.75□□□□□ -1.49
HERC2-201ENST00000261609 TMEM14CQ9P0S9 112 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 THSD7AQ9UPZ6 1657 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 TLN2Q9Y4G6 2542 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 KNCNA6PVL3 124 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 FAM120AOSQ5T036 256 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 E9PLN8 166 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 ZNF493Q6ZR52 646 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 HS3ST6Q96QI5 342 aa5.75□□□□□ -1.49
HERC2-201ENST00000261609 PINLYPA6NC86 204 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 NDUFB8O95169 186 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 FHL1Q13642 323 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 PRB1P04280 392 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 LTAP01374 205 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 COL4A5P29400 1685 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 IGHG2P01859 326 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 FOXL2NBQ6ZUU3 175 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 TRBV19A0A075B6N1 114 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 HIGD1BQ9P298 99 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 BUB1B-PAK6H3BSN5 160 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 PRSS22Q9GZN4 317 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 IGKV1D-17A0A075B6S4 117 aa5.74□□□□□ -1.49
HERC2-201ENST00000261609 ZFHX2Q9C0A1 2572 aaPredicted RBP5.73□□□□□ -1.49
HERC2-201ENST00000261609 TRGV1A0A0A0MS02 117 aa5.73□□□□□ -1.49
HERC2-201ENST00000261609 VMO1Q7Z5L0 202 aa5.73□□□□□ -1.49
HERC2-201ENST00000261609 C20orf78Q9BR46 151 aa5.73□□□□□ -1.49
HERC2-201ENST00000261609 FXYD5Q96DB9 178 aa5.73□□□□□ -1.49
HERC2-201ENST00000261609 DKK1O94907 266 aa5.73□□□□□ -1.49
HERC2-201ENST00000261609 NLRC5Q86WI3 1866 aa5.73□□□□□ -1.49
HERC2-201ENST00000261609 ZNF462Q96JM2 2506 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms