RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 MRPL36Q9P0J6 103 aaKnown RBP13.34□□□□□ -0.27
ACTN4-201ENST00000252699 TRAV12-2A0A075B6T6 113 aa13.33□□□□□ -0.27
ACTN4-201ENST00000252699 LINC01549A6NIU2 74 aa13.33□□□□□ -0.27
ACTN4-201ENST00000252699 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.27
ACTN4-201ENST00000252699 PRSS46E5RG02 174 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 OR2K2Q8NGT1 345 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 COPS9Q8WXC6 57 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 CHTOPQ9Y3Y2 248 aaKnown RBP13.33□□□□□ -0.28
ACTN4-201ENST00000252699 ZFYVE26Q68DK2 2539 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 ARHGAP21Q5T5U3 1957 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 CDKN1BP46527 198 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 PRADC1Q9BSG0 188 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 CRYGCP07315 174 aa13.33□□□□□ -0.28
ACTN4-201ENST00000252699 KNCNA6PVL3 124 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 TYMSP04818 313 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 ANXA2RQ3ZCQ2 193 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 AJUBAQ96IF1 538 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 A8MWP6 167 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 C3orf79P0CE67 100 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 C11orf1Q9H5F2 150 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 A0A1B0GUS0 222 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 FAM104BQ5XKR9 115 aa13.32□□□□□ -0.28
ACTN4-201ENST00000252699 F6UB75 175 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 IGKCP01834 107 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 GP9P14770 177 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 AGPAT4-IT1Q9H0P7 198 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 TNFRSF6BO95407 300 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 FOXE3Q13461 319 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 TMEM158Q8WZ71 300 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 IGHV1OR15-1A0A075B7D0 117 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 PYY3Q5JQD4 70 aa13.31□□□□□ -0.28
ACTN4-201ENST00000252699 C1orf229Q6ZS94 237 aaPredicted RBP13.31□□□□□ -0.28
ACTN4-201ENST00000252699 K7EN84 100 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 DEFB130BP0DP73 79 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 DEFB130AP0DP74 79 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 LINC01559Q495D7 138 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 C18orf32Q8TCD1 76 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 SMIM27A0A1W2PRY6 76 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 LINC00587B1AMM8 73 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 FSTL3O95633 263 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 PLP1P60201 277 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 Q0VG73 95 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 LAMTOR2Q9Y2Q5 125 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 LTAP01374 205 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 NDUFAF3Q9BU61 184 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 KMT2EQ8IZD2 1858 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 DEFB121Q5J5C9 76 aa13.3□□□□□ -0.28
ACTN4-201ENST00000252699 SMIM13P0DJ93 91 aa13.29□□□□□ -0.28
ACTN4-201ENST00000252699 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
ACTN4-201ENST00000252699 BCL6BQ8N143 479 aaPredicted RBP13.29□□□□□ -0.28
ACTN4-201ENST00000252699 SLAQ13239 276 aa13.29□□□□□ -0.28
ACTN4-201ENST00000252699 FAM167A-AS1Q96KT0 104 aa13.29□□□□□ -0.28
ACTN4-201ENST00000252699 ADARB2-AS1A8MUL3 147 aa13.29□□□□□ -0.28
ACTN4-201ENST00000252699 ODF3BA8MYP8 253 aa13.29□□□□□ -0.28
ACTN4-201ENST00000252699 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
ACTN4-201ENST00000252699 COL5A1P20908 1838 aaPredicted RBP13.28□□□□□ -0.28
ACTN4-201ENST00000252699 NDUFS6O75380 124 aaKnown RBP13.28□□□□□ -0.28
ACTN4-201ENST00000252699 C11orf71Q6IPW1 123 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 TSSC4Q9Y5U2 329 aaPredicted RBP13.28□□□□□ -0.28
ACTN4-201ENST00000252699 CCL24O00175 119 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 IGHG2P01859 326 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 BUB3O43684 328 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 ATP6V0BQ99437 205 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 CDSNQ15517 529 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
ACTN4-201ENST00000252699 LRRK2Q5S007 2527 aa13.27□□□□□ -0.28
ACTN4-201ENST00000252699 LOXL1Q08397 574 aaPredicted RBP13.27□□□□□ -0.28
ACTN4-201ENST00000252699 OR13C6PQ8NH95 151 aa13.27□□□□□ -0.28
ACTN4-201ENST00000252699 JMJD1CQ15652 2540 aa13.27□□□□□ -0.28
ACTN4-201ENST00000252699 A0A087WX48 190 aa13.27□□□□□ -0.29
ACTN4-201ENST00000252699 LINC00469Q8N7U9 141 aa13.27□□□□□ -0.29
ACTN4-201ENST00000252699 SYS1-DBNDD2H3BUS1 97 aa13.27□□□□□ -0.29
ACTN4-201ENST00000252699 SLURP1P55000 103 aa13.27□□□□□ -0.29
ACTN4-201ENST00000252699 PRSS57Q6UWY2 283 aa13.27□□□□□ -0.29
ACTN4-201ENST00000252699 OR9G4Q8NGQ1 327 aa13.27□□□□□ -0.29
ACTN4-201ENST00000252699 PHLDA1Q8WV24 401 aaPredicted RBP13.27□□□□□ -0.29
ACTN4-201ENST00000252699 APOMO95445 188 aa13.26□□□□□ -0.29
ACTN4-201ENST00000252699 CIDEAO60543 219 aa13.26□□□□□ -0.29
ACTN4-201ENST00000252699 MCRIP2Q9BUT9 160 aaKnown RBP13.25□□□□□ -0.29
ACTN4-201ENST00000252699 KIAA1549Q9HCM3 1950 aa13.25□□□□□ -0.29
ACTN4-201ENST00000252699 A0A1B0GV90 55 aa13.25□□□□□ -0.29
ACTN4-201ENST00000252699 RHODO00212 210 aa13.25□□□□□ -0.29
ACTN4-201ENST00000252699 MRPL51Q4U2R6 128 aaKnown RBP13.25□□□□□ -0.29
ACTN4-201ENST00000252699 ABCA12Q86UK0 2595 aa13.25□□□□□ -0.29
ACTN4-201ENST00000252699 EIF4EBP1Q13541 118 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-201ENST00000252699 MRPL53Q96EL3 112 aaKnown RBP13.25□□□□□ -0.29
ACTN4-201ENST00000252699 IGHV3-64A0A075B6Q5 118 aa13.24□□□□□ -0.29
ACTN4-201ENST00000252699 CFAP161Q6P656 301 aa13.24□□□□□ -0.29
ACTN4-201ENST00000252699 MRPL16Q9NX20 251 aaKnown RBP13.24□□□□□ -0.29
ACTN4-201ENST00000252699 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
ACTN4-201ENST00000252699 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
ACTN4-201ENST00000252699 TNFRSF13BO14836 293 aaPredicted RBP13.24□□□□□ -0.29
ACTN4-201ENST00000252699 A6NDX4 124 aa13.24□□□□□ -0.29
ACTN4-201ENST00000252699 TRPT1Q86TN4 253 aaKnown RBP13.24□□□□□ -0.29
ACTN4-201ENST00000252699 PRRC2AP48634 2157 aaKnown RBP13.24□□□□□ -0.29
ACTN4-201ENST00000252699 EGR2P11161 476 aaPredicted RBP13.24□□□□□ -0.29
ACTN4-201ENST00000252699 WI2-2373I1.2A0A1W2PRP0 233 aa13.23□□□□□ -0.29
ACTN4-201ENST00000252699 C2CD3Q4AC94 2353 aa13.23□□□□□ -0.29
ACTN4-201ENST00000252699 hDV102S1A0JD36 115 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms