RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 BUB3O43684 328 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 LINC01560Q8TB33 94 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 AGPAT4-IT1Q9H0P7 198 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 AGRNO00468 2067 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 A0A087WX48 190 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 PRTN3P24158 256 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 C12orf74Q32Q52 190 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 Q8N6K4 173 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 ZNF479Q96JC4 524 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 SPANXB1Q9NS25 103 aaPredicted RBP11.94□□□□□ -0.5
DDX55-201ENST00000238146 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 F8W1H4 67 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 TAL2Q16559 108 aa11.94□□□□□ -0.5
DDX55-201ENST00000238146 LRBAP50851 2863 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 IGHV7-81A0A0B4J1V7 117 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 AZU1P20160 251 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 EFNA4P52798 201 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 PRR30Q53SZ7 412 aaPredicted RBP11.93□□□□□ -0.5
DDX55-201ENST00000238146 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 IGHV3-66A0A0C4DH42 116 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 M0R1W7 72 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 GOSR1O95249 250 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
DDX55-201ENST00000238146 H3BMG7 143 aa11.92□□□□□ -0.5
DDX55-201ENST00000238146 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
DDX55-201ENST00000238146 ZNF207O43670 478 aaKnown RBP11.92□□□□□ -0.5
DDX55-201ENST00000238146 CIDEAO60543 219 aa11.92□□□□□ -0.5
DDX55-201ENST00000238146 ZNF502Q8TBZ5 544 aa11.92□□□□□ -0.5
DDX55-201ENST00000238146 SIGMAR1Q99720 223 aa11.92□□□□□ -0.5
DDX55-201ENST00000238146 TSSC4Q9Y5U2 329 aaPredicted RBP11.92□□□□□ -0.5
DDX55-201ENST00000238146 C15orf32Q32M92 178 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 Q6ZQT7 251 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 HIST1H4GQ99525 98 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 IGHV3OR16-13A0A075B7E8 117 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 IGHV3-74A0A0B4J1X5 117 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 CLEC3BP05452 202 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 RAB9AP51151 201 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 CD300EQ496F6 205 aaPredicted RBP11.91□□□□□ -0.5
DDX55-201ENST00000238146 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 AMTNQ6UX39 209 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 SH2D6Q7Z4S9 175 aa11.91□□□□□ -0.5
DDX55-201ENST00000238146 CLPSL1A2RUU4 121 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 PLNP26678 52 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 EBI3Q14213 229 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 TRBV7-3A0A075B6L6 115 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 TRAV8-2A0A0B4J237 113 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 TMEM11P17152 192 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 ETDBQ3ZM63 59 aa11.9□□□□□ -0.5
DDX55-201ENST00000238146 ANKHD1Q8IWZ3 2542 aaKnown RBP11.89□□□□□ -0.51
DDX55-201ENST00000238146 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
DDX55-201ENST00000238146 IGHV4-4A0A075B6R2 117 aa11.89□□□□□ -0.51
DDX55-201ENST00000238146 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
DDX55-201ENST00000238146 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
DDX55-201ENST00000238146 Q8N9W7 124 aa11.89□□□□□ -0.51
DDX55-201ENST00000238146 F8VRH5 84 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 SCGB1A1P11684 91 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 RRN3P1Q2M238 152 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
DDX55-201ENST00000238146 CACNA1BQ00975 2339 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 H7C1H1 209 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 J3QR89 54 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 GRNP28799 593 aaKnown RBP11.88□□□□□ -0.51
DDX55-201ENST00000238146 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 MSRB2Q9Y3D2 182 aa11.88□□□□□ -0.51
DDX55-201ENST00000238146 IGHV3-49A0A0A0MS15 119 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 MTURNQ8N3F0 131 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
DDX55-201ENST00000238146 PRO0461Q9UI25 63 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 ECSCRQ19T08 205 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 GAGE13Q4V321 117 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
DDX55-201ENST00000238146 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 SPATA25Q9BR10 227 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 MYMXA0A1B0GTQ4 84 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 OR11H12B2RN74 326 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 LINC01619G3V211 115 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 H3BVH4 76 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 CLEC19AQ6UXS0 136 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 C8orf86Q6ZUL3 223 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 OR11H1Q8NG94 326 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 OR11H2Q8NH07 326 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 VKORC1Q9BQB6 163 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 ZNF292O60281 2723 aa11.86□□□□□ -0.51
DDX55-201ENST00000238146 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
DDX55-201ENST00000238146 RIF1Q5UIP0 2472 aaKnown RBP11.85□□□□□ -0.51
DDX55-201ENST00000238146 MINOS1Q5TGZ0 78 aa11.85□□□□□ -0.51
DDX55-201ENST00000238146 MINOS1-NBL1R4GNA1 71 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms