RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SMIM2Q9BVW6 85 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 A0A096LPF7 62 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 NDUFA4O00483 81 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 IGLV1-44P01699 117 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 TCTEX1D4Q5JR98 221 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 CFHR4Q92496 578 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 F5H768 121 aa10.59□□□□□ -0.71
NEK4-201ENST00000233027 KLF2Q9Y5W3 355 aaPredicted RBP10.59□□□□□ -0.71
NEK4-201ENST00000233027 F6UB75 175 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 KMT2EQ8IZD2 1858 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 DYNAPQ8N1N2 210 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 NCOR1P1Q9H4R4 102 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 RHODO00212 210 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 GNRH2O43555 120 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 FOXE3Q13461 319 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 CLPSL2Q6UWE3 100 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 LYPD6BQ8NI32 183 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 CEP250Q9BV73 2442 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 F8VRH5 84 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
NEK4-201ENST00000233027 DOCK9Q9BZ29 2069 aa10.57□□□□□ -0.72
NEK4-201ENST00000233027 EGR2P11161 476 aaPredicted RBP10.57□□□□□ -0.72
NEK4-201ENST00000233027 ZNF491Q8N8L2 437 aa10.57□□□□□ -0.72
NEK4-201ENST00000233027 K7EM74 188 aa10.57□□□□□ -0.72
NEK4-201ENST00000233027 FGF23Q9GZV9 251 aaPredicted RBP10.57□□□□□ -0.72
NEK4-201ENST00000233027 SPTA1P02549 2419 aa10.57□□□□□ -0.72
NEK4-201ENST00000233027 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
NEK4-201ENST00000233027 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
NEK4-201ENST00000233027 TMEM243Q9BU79 118 aa10.57□□□□□ -0.72
NEK4-201ENST00000233027 ZNF561-AS1K7EIQ3 104 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 SP5Q6BEB4 398 aaPredicted RBP10.56□□□□□ -0.72
NEK4-201ENST00000233027 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 K7ENP7 123 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 J3QQQ9 107 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 NUPR1O60356 82 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 CEACAM8P31997 349 aaPredicted RBP10.56□□□□□ -0.72
NEK4-201ENST00000233027 DAD1P61803 113 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 C12orf74Q32Q52 190 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 Q96MF0 132 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 FAM215AQ9Y5M1 114 aa10.56□□□□□ -0.72
NEK4-201ENST00000233027 IGLC7A0M8Q6 106 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 C11orf53Q8IXP5 236 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 TRAV12-1A0A0B4J245 112 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 IFITM1P13164 125 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 KLF5Q13887 457 aaPredicted RBP10.55□□□□□ -0.72
NEK4-201ENST00000233027 SSC4DQ8WTU2 575 aa10.55□□□□□ -0.72
NEK4-201ENST00000233027 CCL25O15444 150 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 RS1O15537 224 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
NEK4-201ENST00000233027 RITA1Q96K30 269 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 POLEQ07864 2286 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 KIAA1671Q9BY89 1806 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 SUMO4Q6EEV6 95 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 SCRT2Q9NQ03 307 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 DOCK8Q8NF50 2099 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 TINCRA0A1B0GVN0 87 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 LINC00173Q6ZV60 143 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 CITED2Q99967 270 aaPredicted RBP10.54□□□□□ -0.72
NEK4-201ENST00000233027 CTSZQ9UBR2 303 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 HAMPP81172 84 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
NEK4-201ENST00000233027 K7EMI3 77 aa10.53□□□□□ -0.72
NEK4-201ENST00000233027 PI4KAP42356 2102 aa10.53□□□□□ -0.72
NEK4-201ENST00000233027 FRMPD3Q5JV73 1810 aa10.53□□□□□ -0.72
NEK4-201ENST00000233027 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.53□□□□□ -0.72
NEK4-201ENST00000233027 IGKV2-29A2NJV5 120 aaPredicted RBP10.53□□□□□ -0.72
NEK4-201ENST00000233027 PRSS29PA6NIE9 313 aa10.53□□□□□ -0.72
NEK4-201ENST00000233027 CRLF1O75462 422 aa10.53□□□□□ -0.72
NEK4-201ENST00000233027 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
NEK4-201ENST00000233027 C22orf46C9J442 243 aa10.52□□□□□ -0.73
NEK4-201ENST00000233027 SIVA1O15304 175 aa10.52□□□□□ -0.73
NEK4-201ENST00000233027 GATA3P23771 443 aa10.52□□□□□ -0.73
NEK4-201ENST00000233027 TAL2Q16559 108 aa10.52□□□□□ -0.73
NEK4-201ENST00000233027 IGFL3Q6UXB1 125 aa10.52□□□□□ -0.73
NEK4-201ENST00000233027 WIPF2Q8TF74 440 aaPredicted RBP10.52□□□□□ -0.73
NEK4-201ENST00000233027 DIDO1Q9BTC0 2240 aaKnown RBP10.52□□□□□ -0.73
NEK4-201ENST00000233027 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
NEK4-201ENST00000233027 AGPAT4-IT1Q9H0P7 198 aa10.51□□□□□ -0.73
NEK4-201ENST00000233027 Q71RC1 249 aaPredicted RBP10.51□□□□□ -0.73
NEK4-201ENST00000233027 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
NEK4-201ENST00000233027 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
NEK4-201ENST00000233027 POU2AF1Q16633 256 aa10.51□□□□□ -0.73
NEK4-201ENST00000233027 NTN5Q8WTR8 489 aaPredicted RBP10.51□□□□□ -0.73
NEK4-201ENST00000233027 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
NEK4-201ENST00000233027 IGF2BP2-AS1Q96M15 143 aa10.51□□□□□ -0.73
NEK4-201ENST00000233027 PRSS33Q8NF86 280 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
NEK4-201ENST00000233027 MRPL53Q96EL3 112 aaKnown RBP10.5□□□□□ -0.73
NEK4-201ENST00000233027 UTF1Q5T230 341 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms