RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NDUFS6O75380 124 aaKnown RBP9.15□□□□□ -0.94
NOD1-201ENST00000222823 LY6G5BQ8NDX9 201 aa9.15□□□□□ -0.94
NOD1-201ENST00000222823 VGLL1Q99990 258 aa9.15□□□□□ -0.94
NOD1-201ENST00000222823 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
NOD1-201ENST00000222823 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.95
NOD1-201ENST00000222823 C11orf52Q96A22 123 aa9.15□□□□□ -0.95
NOD1-201ENST00000222823 JPT2Q9H910 190 aa9.15□□□□□ -0.95
NOD1-201ENST00000222823 V9GYV3 84 aa9.15□□□□□ -0.95
NOD1-201ENST00000222823 CPAMD8Q8IZJ3 1885 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 NPC2P61916 151 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 STPG4Q8N801 248 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 DKK4Q9UBT3 224 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 IGF2RP11717 2491 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 HIVEP3Q5T1R4 2406 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 H3BRN7 92 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 GRNP28799 593 aaKnown RBP9.14□□□□□ -0.95
NOD1-201ENST00000222823 S100A7L2Q5SY68 101 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 Q96MF0 132 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 RHODO00212 210 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 TCTEX1D4Q5JR98 221 aa9.14□□□□□ -0.95
NOD1-201ENST00000222823 SHISA9B4DS77 424 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
NOD1-201ENST00000222823 SPXQ9BT56 116 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 C2orf66Q6UXQ4 117 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 ZNF491Q8N8L2 437 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 THAP8Q8NA92 274 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 BRCA2P51587 3418 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 A0A1W2PNU3 283 aaPredicted RBP9.13□□□□□ -0.95
NOD1-201ENST00000222823 ATXN8Q156A1 80 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 C1orf122Q6ZSJ8 110 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 C11orf68Q9H3H3 251 aaKnown RBP9.13□□□□□ -0.95
NOD1-201ENST00000222823 DLEU1O43261 78 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 SLAQ13239 276 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 PRSS57Q6UWY2 283 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
NOD1-201ENST00000222823 LINC01619G3V211 115 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 VWC2Q2TAL6 325 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 PRIMA1Q86XR5 153 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 TLN1Q9Y490 2541 aaKnown RBP9.12□□□□□ -0.95
NOD1-201ENST00000222823 NAV3Q8IVL0 2385 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 IGLV2-14P01704 120 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 DEFB121Q5J5C9 76 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 PRO3102Q9H379 93 aa9.12□□□□□ -0.95
NOD1-201ENST00000222823 C8orf31Q8N9H6 132 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 KLK9Q9UKQ9 250 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 NACAE9PAV3 2078 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 MYMXA0A1B0GTQ4 84 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 J3QLI3 93 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 IGHV2-70P01814 119 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 TDGF1P3P51864 188 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 ESDP10768 282 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 CDKN1BP46527 198 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 CST9LQ9H4G1 147 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 CHD3Q12873 2000 aaKnown RBP9.11□□□□□ -0.95
NOD1-201ENST00000222823 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
NOD1-201ENST00000222823 C3orf56Q8N813 242 aa9.11□□□□□ -0.95
NOD1-201ENST00000222823 LAMA2P24043 3122 aaKnown RBP9.1□□□□□ -0.95
NOD1-201ENST00000222823 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 LHBP01229 141 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 SSBP2P81877 361 aaPredicted RBP9.1□□□□□ -0.95
NOD1-201ENST00000222823 POLR3KQ9Y2Y1 108 aaPredicted RBP9.1□□□□□ -0.95
NOD1-201ENST00000222823 GATD1Q8NB37 220 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 CHAC1Q9BUX1 264 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 TCF15Q12870 199 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 SPRNQ5BIV9 151 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 Q8N8P6 123 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 ZC2HC1AQ96GY0 325 aa9.1□□□□□ -0.95
NOD1-201ENST00000222823 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 CD5LO43866 347 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 TRAV12-2A0A075B6T6 113 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 ELANEP08246 267 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 ZNF124Q15973 351 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 IGF2-ASQ6U949 168 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 MED12LQ86YW9 2145 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 EXPH5Q8NEV8 1989 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 IGHV3-16A0A0C4DH30 117 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 ODF3L1Q8IXM7 274 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 GAGE12JA6NER3 117 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 GAGE1Q13065 139 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 GAGE4Q13068 117 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 GAGE5Q13069 117 aa9.09□□□□□ -0.95
NOD1-201ENST00000222823 DLX4Q92988 240 aaPredicted RBP9.08□□□□□ -0.96
NOD1-201ENST00000222823 LAMA3Q16787 3333 aa9.08□□□□□ -0.96
NOD1-201ENST00000222823 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
NOD1-201ENST00000222823 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
NOD1-201ENST00000222823 LURAP1LQ8IV03 231 aa9.08□□□□□ -0.96
NOD1-201ENST00000222823 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
NOD1-201ENST00000222823 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
NOD1-201ENST00000222823 IGHV7-4-1A0A0J9YVY3 117 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 J3QKU1 62 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 SS18Q15532 418 aa9.07□□□□□ -0.96
NOD1-201ENST00000222823 OR11H6Q8NGC7 330 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms