RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 SLC25A39Q9BZJ4 359 aaPredicted RBP12.36□□□□□ -0.43
LINC02228-204ENST00000642115 B5MCH6 92 aa12.36□□□□□ -0.43
LINC02228-204ENST00000642115 FBXL15Q9H469 300 aa12.36□□□□□ -0.43
LINC02228-204ENST00000642115 IGKCP01834 107 aa12.36□□□□□ -0.43
LINC02228-204ENST00000642115 TRGV9Q99603 122 aa12.36□□□□□ -0.43
LINC02228-204ENST00000642115 ANAPC13Q9BS18 74 aa12.36□□□□□ -0.43
LINC02228-204ENST00000642115 COX7A1P24310 79 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 CKS2P33552 79 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 LINC00574Q9H8X3 128 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 ZFHX2Q9C0A1 2572 aaPredicted RBP12.35□□□□□ -0.43
LINC02228-204ENST00000642115 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC02228-204ENST00000642115 KLF17Q5JT82 389 aaPredicted RBP12.35□□□□□ -0.43
LINC02228-204ENST00000642115 PTH2Q96A98 100 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 TMEM133Q9H2Q1 129 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 FAM215AQ9Y5M1 114 aa12.35□□□□□ -0.43
LINC02228-204ENST00000642115 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
LINC02228-204ENST00000642115 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 VSTM5A8MXK1 200 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 CNIH1O95406 144 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 EVI2AP22794 236 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 GAGE5Q13069 117 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 GAGE6Q13070 117 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 FOXC2Q99958 501 aa12.34□□□□□ -0.43
LINC02228-204ENST00000642115 PRSS29PA6NIE9 313 aa12.33□□□□□ -0.43
LINC02228-204ENST00000642115 LINC01548A6NM66 108 aa12.33□□□□□ -0.43
LINC02228-204ENST00000642115 HOXB4P17483 251 aaPredicted RBP12.33□□□□□ -0.43
LINC02228-204ENST00000642115 LEPP41159 167 aa12.33□□□□□ -0.43
LINC02228-204ENST00000642115 TMEM160Q9NX00 188 aa12.33□□□□□ -0.43
LINC02228-204ENST00000642115 TMEM8BA6NDV4 472 aa12.33□□□□□ -0.44
LINC02228-204ENST00000642115 MBD3L4A6NDZ8 208 aaPredicted RBP12.33□□□□□ -0.44
LINC02228-204ENST00000642115 MBD3L3A6NE82 208 aaPredicted RBP12.33□□□□□ -0.44
LINC02228-204ENST00000642115 MBD3L5A6NJ08 208 aaPredicted RBP12.33□□□□□ -0.44
LINC02228-204ENST00000642115 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
LINC02228-204ENST00000642115 GAS8-AS1O95177 125 aa12.33□□□□□ -0.44
LINC02228-204ENST00000642115 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
LINC02228-204ENST00000642115 MBD3L2Q8NHZ7 208 aaPredicted RBP12.33□□□□□ -0.44
LINC02228-204ENST00000642115 RALYQ9UKM9 306 aaKnown RBP12.33□□□□□ -0.44
LINC02228-204ENST00000642115 C17orf100A8MU93 164 aa12.33□□□□□ -0.44
LINC02228-204ENST00000642115 TEX36Q5VZQ5 186 aa12.33□□□□□ -0.44
LINC02228-204ENST00000642115 CTSZQ9UBR2 303 aa12.33□□□□□ -0.44
LINC02228-204ENST00000642115 SPTBN1Q01082 2364 aaKnown RBP12.32□□□□□ -0.44
LINC02228-204ENST00000642115 TRAV40A0A0B4J280 105 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 FAM90A27PA6NNH2 459 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 MRGPRG-AS1Q2M3A8 158 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 TMEM95Q3KNT9 176 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 SFTA2Q6UW10 78 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 CRYGCP07315 174 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 HERV-K104P63124 156 aa12.32□□□□□ -0.44
LINC02228-204ENST00000642115 MORN3Q6PF18 240 aaPredicted RBP12.32□□□□□ -0.44
LINC02228-204ENST00000642115 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 ANXA2RQ3ZCQ2 193 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 Q6AWC8 147 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 PRSS33Q8NF86 280 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 IGHV3OR16-8A0A075B7F1 116 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 INS-IGF2F8WCM5 200 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 LYNX1G3V0Z9 82 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 IL4P05112 153 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 LYNX1P0DP58 116 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 ADIPOQQ15848 244 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 IGFL4Q6B9Z1 124 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 CARD19Q96LW7 228 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 NGBQ9NPG2 151 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 SIGLEC9Q9Y336 463 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 SVEP1Q4LDE5 3571 aa12.31□□□□□ -0.44
LINC02228-204ENST00000642115 DPM2O94777 84 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 TMEM30BQ3MIR4 351 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 DEFB124Q8NES8 71 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
LINC02228-204ENST00000642115 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 ATP6V0E2Q8NHE4 81 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 TMEM178BH3BS89 294 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 LOXP28300 417 aaPredicted RBP12.3□□□□□ -0.44
LINC02228-204ENST00000642115 BSPH1Q075Z2 132 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 TAL2Q16559 108 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 PSMG4Q5JS54 123 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 DYNLRB1Q9NP97 96 aa12.3□□□□□ -0.44
LINC02228-204ENST00000642115 OTOGLQ3ZCN5 2332 aa12.29□□□□□ -0.44
LINC02228-204ENST00000642115 TRBV7-9A0A0J9YWB2 115 aa12.29□□□□□ -0.44
LINC02228-204ENST00000642115 LRBAP50851 2863 aa12.29□□□□□ -0.44
LINC02228-204ENST00000642115 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
LINC02228-204ENST00000642115 TWIST1Q15672 202 aa12.29□□□□□ -0.44
LINC02228-204ENST00000642115 SCNM1Q9BWG6 230 aa12.29□□□□□ -0.44
LINC02228-204ENST00000642115 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
LINC02228-204ENST00000642115 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 IGKV1-17P01599 117 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
LINC02228-204ENST00000642115 TMEM75Q8N9X5 138 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 Q8TAT8 98 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 TMEM158Q8WZ71 300 aa12.28□□□□□ -0.44
LINC02228-204ENST00000642115 IGKV2-40A0A087WW87 121 aaPredicted RBP12.27□□□□□ -0.44
LINC02228-204ENST00000642115 TRBV6-1A0A0K0K1D8 114 aa12.27□□□□□ -0.44
LINC02228-204ENST00000642115 IGKV2D-40P01614 121 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms