RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 TSC22D2O75157 780 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 MPDU1O75352 247 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 GPX1P07203 203 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 EVI2AP22794 236 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 SRIP30626 198 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 INPP1P49441 399 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 BCAP31P51572 246 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 CRYBA4P53673 196 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 TMBIM6P55061 237 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 UBE2MP61081 183 aaKnown RBP10.18□□□□□ -0.78
SYNE2-228ENST00000639659 VAMP2P63027 116 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 GUK1Q16774 197 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 C4orf46Q504U0 113 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 NEGR1Q7Z3B1 354 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 NRARPQ7Z6K4 114 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 PCNPQ8WW12 178 aaKnown RBP10.18□□□□□ -0.78
SYNE2-228ENST00000639659 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 HHLA3Q9XRX5 114 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 TIMM9Q9Y5J7 89 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 V9GYH0 126 aa10.18□□□□□ -0.78
SYNE2-228ENST00000639659 H3BMQ9 156 aa10.17□□□□□ -0.78
SYNE2-228ENST00000639659 PSCAO43653 123 aa10.17□□□□□ -0.78
SYNE2-228ENST00000639659 RAB31Q13636 194 aa10.17□□□□□ -0.78
SYNE2-228ENST00000639659 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
SYNE2-228ENST00000639659 OR1L4Q8NGR5 311 aa10.17□□□□□ -0.78
SYNE2-228ENST00000639659 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-228ENST00000639659 KLLNB2CW77 178 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-228ENST00000639659 SFTA3P0C7M3 94 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 TAS2R30P59541 319 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 Q6ZQT7 251 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 EXOC3-AS1Q8N2X6 119 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 VGLL1Q99990 258 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 BCL7BQ9BQE9 202 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 AGPAT4-IT1Q9H0P7 198 aa10.16□□□□□ -0.78
SYNE2-228ENST00000639659 LSM5Q9Y4Y9 91 aaKnown RBP10.16□□□□□ -0.78
SYNE2-228ENST00000639659 TRBV19A0A075B6N1 114 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 IGHV1OR15-1A0A075B7D0 117 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 UBE2L5PA0A1B0GUS4 154 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 C7orf66A4D0T2 115 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 CCSO14618 274 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 CST7O76096 145 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 CRYGDP07320 174 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 PYYP10082 97 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 S100A5P33763 92 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 CAV2P51636 162 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 BAXQ07812 192 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 SLAQ13239 276 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 FHL2Q14192 279 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 IBA57Q5T440 356 aaKnown RBP10.15□□□□□ -0.78
SYNE2-228ENST00000639659 TMEM78Q5T7P6 136 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 PRR9Q5T870 116 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 FAM122CQ6P4D5 195 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 MRPL53Q96EL3 112 aaKnown RBP10.15□□□□□ -0.78
SYNE2-228ENST00000639659 PFDN5Q99471 154 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 GGACTQ9BVM4 153 aa10.15□□□□□ -0.78
SYNE2-228ENST00000639659 FAM25EA8MYX2 175 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 K7EQD1 137 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 NDUFB6O95139 128 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 MBPP02686 304 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-228ENST00000639659 GYPEP15421 78 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 DEDD2Q8WXF8 326 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 LINC00477Q96M19 166 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 AAMDCQ9H7C9 122 aa10.14□□□□□ -0.79
SYNE2-228ENST00000639659 ZNF253O75346 499 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 HIST1H1EP10412 219 aaKnown RBP10.13□□□□□ -0.79
SYNE2-228ENST00000639659 ZNF846Q147U1 533 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 TRIQKQ629K1 86 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 C12orf45Q8N5I9 185 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-228ENST00000639659 Q8TAT8 98 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 SLC39A9Q9NUM3 307 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 UQCC1Q9NVA1 299 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 PRELID1Q9Y255 219 aa10.13□□□□□ -0.79
SYNE2-228ENST00000639659 CCDC160A6NGH7 325 aa10.12□□□□□ -0.79
SYNE2-228ENST00000639659 NDUFB4O95168 129 aa10.12□□□□□ -0.79
SYNE2-228ENST00000639659 ZFAND2AQ8N6M9 145 aa10.12□□□□□ -0.79
SYNE2-228ENST00000639659 ZNF479Q96JC4 524 aa10.12□□□□□ -0.79
SYNE2-228ENST00000639659 FAM19A4Q96LR4 140 aa10.12□□□□□ -0.79
SYNE2-228ENST00000639659 MRPL32Q9BYC8 188 aaKnown RBP10.12□□□□□ -0.79
SYNE2-228ENST00000639659 Q9HAA7 133 aa10.12□□□□□ -0.79
SYNE2-228ENST00000639659 FAM24AA6NFZ4 105 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 CRISP2P16562 243 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 FGF7P21781 194 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 TMEM70Q9BUB7 260 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 C20orf85Q9H1P6 137 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 GPN1Q9HCN4 374 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-228ENST00000639659 WDR83OSQ9Y284 106 aa10.11□□□□□ -0.79
SYNE2-228ENST00000639659 NAP1L6A6NFF2 107 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 PPT1P50897 306 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 S100A10P60903 97 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 NHLRC2Q8NBF2 726 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 TXNDC17Q9BRA2 123 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 SLC25A31Q9H0C2 315 aa10.1□□□□□ -0.79
SYNE2-228ENST00000639659 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 495 ms