RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 CACYBPQ9HB71 228 aaKnown RBP-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 PLEKHJ1Q9NW61 149 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 COMMD3Q9UBI1 195 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 USF3Q68DE3 2245 aa-2.19□□□□□ -2.76
SCN1A-215ENST00000637285 MYO18BQ8IUG5 2567 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 BBIP1A8MTZ0 92 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 TAX1BP3O14907 124 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 CST8O60676 142 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 APOEP02649 317 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 SPINK8P0C7L1 97 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 GLRXP35754 106 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 TMEM141Q96I45 108 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 TEX37Q96LM6 180 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 ARHGAP31Q2M1Z3 1444 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 RYR2Q92736 4967 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 CEP164Q9UPV0 1460 aa-2.2□□□□□ -2.76
SCN1A-215ENST00000637285 LOC100506127A0A0U1RQW1 187 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 GOLGA8KD6RF30 607 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 M0R036 132 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 GGCTO75223 188 aaKnown RBP-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 TACC2O95359 2948 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 C1QBP02746 253 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 PYYP10082 97 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 GCHFRP30047 84 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 PIGPP57054 158 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 FAM74A4Q5TZK3 123 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 TCTEX1D1Q8N7M0 179 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 TMEM242Q9NWH2 141 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 RAD50Q92878 1312 aa-2.21□□□□□ -2.76
SCN1A-215ENST00000637285 BIRC6Q9NR09 4857 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 SONP18583 2426 aaKnown RBP-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 TMEM30CPA0ZSE6 113 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 FABP12A6NFH5 140 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 M0QZ92 97 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 RER1O15258 196 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 TPST1O60507 370 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 TNNC2P02585 160 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 C8GP07360 202 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 IQCJQ1A5X6 159 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 ACOT6Q3I5F7 207 aaPredicted RBP-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 IZUMO2Q6UXV1 221 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 Q6ZRX8 168 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 OR6V1Q8N148 313 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 DMAC1Q96GE9 116 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 DCUN1D1Q96GG9 259 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 EFCAB11Q9BUY7 163 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 MRPS26Q9BYN8 205 aaKnown RBP-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 AGPAT3Q9NRZ7 376 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 FGFR1OP2Q9NVK5 253 aa-2.22□□□□□ -2.76
SCN1A-215ENST00000637285 ZCCHC6Q5VYS8 1495 aaKnown RBP-2.22□□□□□ -2.77
SCN1A-215ENST00000637285 PI4KAP42356 2102 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 KIAA0100Q14667 2235 aaKnown RBP-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 TRAV12-2A0A075B6T6 113 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 A0A0A6YYH2 397 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 TGIF2-C20orf24A0A0A6YYL0 155 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 C3orf85A0A1B0GTC6 90 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 A6NJ64 397 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 NDUFS6O75380 124 aaKnown RBP-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 IGKCP01834 107 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 COX5BP10606 129 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 ELOF1P60002 83 aaKnown RBP-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 LYPD5Q6UWN5 251 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 PPP1R1CQ8WVI7 109 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 BET1LQ9NYM9 111 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 GLTPQ9NZD2 209 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 CHMP5Q9NZZ3 219 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 ANK1P16157 1881 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 DOCK11Q5JSL3 2073 aa-2.23□□□□□ -2.77
SCN1A-215ENST00000637285 RNF213Q63HN8 5207 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 FMN1Q68DA7 1419 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 C10orf71Q711Q0 1435 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 K7ERJ3 54 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 CALUO43852 315 aaPredicted RBP-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 LYPLA2O95372 231 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 IFNA4P05014 189 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 CCKP06307 115 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 IVLP07476 585 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 OGFRL1Q5TC84 451 aaPredicted RBP-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 CMSS1Q9BQ75 279 aaKnown RBP-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 C7orf50Q9BRJ6 194 aaKnown RBP-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 SIKE1Q9BRV8 207 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 DLEC1Q9Y238 1755 aa-2.24□□□□□ -2.77
SCN1A-215ENST00000637285 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 hADV38S2A0JD32 116 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 TRPC5OSA6NMA1 111 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 TTRP02766 147 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 IL7P13232 177 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 TMEM229BQ8NBD8 167 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 MAP1LC3BQ9GZQ8 125 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 ATG5Q9H1Y0 275 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 OR52A5Q9H2C5 316 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 TREM1Q9NP99 234 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 UQCC1Q9NVA1 299 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 MUC17Q685J3 4493 aa-2.25□□□□□ -2.77
SCN1A-215ENST00000637285 FRMPD1Q5SYB0 1578 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 ARL5CA6NH57 179 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 ZNF670-ZNF695F2Z2N8 137 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 CNIH1O95406 144 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 TNFP01375 233 aa-2.26□□□□□ -2.77
SCN1A-215ENST00000637285 CRHP06850 196 aa-2.26□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms