RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 AGTR1P30556 359 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST1H2BBP33778 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 RPS5P46782 204 aaKnown RBP-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 TTPAP49638 278 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 SNU13P55769 128 aaKnown RBP-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST1H2BDP58876 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 TAS2R39P59534 338 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST1H2BCP62807 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 PAFAH1B2P68402 229 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST2H2BEQ16778 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 C9orf116Q5BN46 136 aaPredicted RBP-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 C6orf226Q5I0X4 101 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST2H2BFQ5QNW6 126 aaPredicted RBP-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 TMEM170BQ5T4T1 132 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 PMF1Q6P1K2 205 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 RPL22L1Q6P5R6 122 aaKnown RBP-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 ALKAL1Q6UXT8 129 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 Q6ZUT4 128 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 GOLT1AQ6ZVE7 132 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 EIF3MQ7L2H7 374 aaKnown RBP-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 SCD5Q86SK9 330 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 TRAPPC6BQ86SZ2 158 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 NDUFA11Q86Y39 141 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 FUNDC1Q8IVP5 155 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 SYCP3Q8IZU3 236 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 PQLC3Q8N755 202 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 OR8J3Q8NGG0 315 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 OR5D16Q8NGK9 328 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 CLHC1Q8NHS4 586 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST1H2BHQ93079 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 FAM210AQ96ND0 272 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 CIB1Q99828 191 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST1H2BNQ99877 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 HIST1H2BMQ99879 126 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 DHRS9Q9BPW9 319 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 ENY2Q9NPA8 101 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 AK3Q9UIJ7 227 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 STX8Q9UNK0 236 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 CYSLTR1Q9Y271 337 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 CFL2Q9Y281 166 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 UFC1Q9Y3C8 167 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 AP1M2Q9Y6Q5 423 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 SYNJ1O43426 1573 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 SMARCA2P51531 1590 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 PSME4Q14997 1843 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 KIF15Q9NS87 1388 aa-1.98□□□□□ -2.73
CDKL5-210ENST00000636046 RIMBP3CA6NJZ7 1639 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 RIMBP3BA6NNM3 1639 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 DNMT1P26358 1616 aaKnown RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 RIMBP3Q9UFD9 1639 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CLIP1P30622 1438 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 NPATQ14207 1427 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 RIMS2Q9UQ26 1411 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 MBD5Q9P267 1494 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 TMED7-TICAM2A0A0A6YYA0 188 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 C3orf85A0A1B0GTC6 90 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 hADV38S2A0JD32 116 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 A8MT66 165 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 HUS1O60921 280 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 NIPSNAP2O75323 286 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 TRAPPC6AO75865 159 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CD160O95971 181 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 GCGP01275 180 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 TFF1P04155 84 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 SAA1P0DJI8 122 aaPredicted RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 HNMTP50135 292 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 YPEL3P61236 119 aaPredicted RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 OR8B8Q15620 311 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 HSDL1Q3SXM5 330 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 LAMTOR1Q6IAA8 161 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 TMEM53Q6P2H8 277 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 Q6Q795 121 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 SPESP1Q6UW49 350 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 HOOK3Q86VS8 718 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CCDC148Q8NFR7 591 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 OR51Q1Q8NH59 317 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CDC26Q8NHZ8 85 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 MRPL30Q8TCC3 161 aaKnown RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CA5BP1Q8WTZ4 195 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 DTNBP1Q96EV8 351 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CIB3Q96Q77 187 aaPredicted RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 TMEM109Q9BVC6 243 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 ELOVL6Q9H5J4 265 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CHMP2BQ9UQN3 213 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 CRYL1Q9Y2S2 319 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 PLXNC1O60486 1568 aa-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 MED1Q15648 1581 aaPredicted RBP-1.99□□□□□ -2.73
CDKL5-210ENST00000636046 NUP210Q8TEM1 1887 aaPredicted RBP-2□□□□□ -2.73
CDKL5-210ENST00000636046 MAST1Q9Y2H9 1570 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 A0A087X0M5 115 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 TRAV5A0A0B4J249 113 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 TRAV34A0A0B4J273 112 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 GOLGA8QA0A0J9YX86 632 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 TINCRA0A1B0GVN0 87 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 A0A1B0GX30 115 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 SMIM30A4D0T7 59 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 GOLGA8OA6NCC3 632 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 TMEM210A6NLX4 147 aa-2□□□□□ -2.73
CDKL5-210ENST00000636046 GOLGA8NF8WBI6 632 aa-2□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms