RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 ZNF503Q96F45 646 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 PSMG3Q9BT73 122 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-207ENST00000634712 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 Q9H3A6 140 aa11.19□□□□□ -0.62
LINC00339-207ENST00000634712 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-207ENST00000634712 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00339-207ENST00000634712 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-207ENST00000634712 ATP6V0CP27449 155 aa11.18□□□□□ -0.62
LINC00339-207ENST00000634712 FAM74A1Q5RGS3 127 aa11.18□□□□□ -0.62
LINC00339-207ENST00000634712 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
LINC00339-207ENST00000634712 NDUFAF3Q9BU61 184 aa11.18□□□□□ -0.62
LINC00339-207ENST00000634712 TNFSF18Q9UNG2 199 aa11.18□□□□□ -0.62
LINC00339-207ENST00000634712 GPX1P07203 203 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 DEFB130BP0DP73 79 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 DEFB130AP0DP74 79 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 CDC34P49427 236 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-207ENST00000634712 SERF2P84101 59 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 OR2G3Q8NGZ4 309 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 CMTM2Q8TAZ6 248 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 RXFP4Q8TDU9 374 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
LINC00339-207ENST00000634712 GNPNAT1Q96EK6 184 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-207ENST00000634712 HYLS1Q96M11 299 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 VGLL1Q99990 258 aa11.17□□□□□ -0.62
LINC00339-207ENST00000634712 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-207ENST00000634712 C7orf71A4D174 169 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 RNF222A6NCQ9 220 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 HMGB3O15347 200 aaKnown RBP11.16□□□□□ -0.62
LINC00339-207ENST00000634712 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
LINC00339-207ENST00000634712 FAM210BQ96KR6 192 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 PYGO2Q9BRQ0 406 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 HYDINQ4G0P3 5121 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 PGPA6NDG6 321 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 ZNF138P52744 262 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 RPL7L1Q6DKI1 246 aaKnown RBP11.16□□□□□ -0.62
LINC00339-207ENST00000634712 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
LINC00339-207ENST00000634712 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
LINC00339-207ENST00000634712 RBAKDNA6NC62 111 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 SNURFLB1AK76 121 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 TAAR5O14804 337 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 ARPC5O15511 151 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 NMBP08949 121 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 RNASE8Q8TDE3 154 aaKnown RBP11.15□□□□□ -0.63
LINC00339-207ENST00000634712 FAM19A4Q96LR4 140 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 ACTR3CQ9C0K3 210 aaPredicted RBP11.15□□□□□ -0.63
LINC00339-207ENST00000634712 SH3BGRL3Q9H299 93 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 RPH3ALQ9UNE2 315 aa11.15□□□□□ -0.63
LINC00339-207ENST00000634712 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 KLLNB2CW77 178 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 DIRC3C9JPN6 131 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 ARL14EPLP0DKL9 152 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 CRISP2P16562 243 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 CD300CQ08708 224 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 BTN1A1Q13410 526 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
LINC00339-207ENST00000634712 CBY3A6NI87 242 aa11.13□□□□□ -0.63
LINC00339-207ENST00000634712 STAG3L2P0CL84 134 aa11.13□□□□□ -0.63
LINC00339-207ENST00000634712 STAG3L3P0CL85 134 aa11.13□□□□□ -0.63
LINC00339-207ENST00000634712 TRBV7-9A0A0J9YWB2 115 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 F5H768 121 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 SMLR1H3BR10 107 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 RGS13O14921 159 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 ZNF324O75467 553 aaPredicted RBP11.12□□□□□ -0.63
LINC00339-207ENST00000634712 CXorf1O96002 111 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 ATP5G1P05496 136 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 P0DMU3 169 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 ATP5G3P48201 142 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
LINC00339-207ENST00000634712 Q8TAT8 98 aa11.12□□□□□ -0.63
LINC00339-207ENST00000634712 G3V3Q6 166 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 GCHFRP30047 84 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 AKR1C8PQ5T2L2 129 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 TMEM88Q6PEY1 159 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 IQCF2Q8IXL9 164 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 ZFAND2AQ8N6M9 145 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 ARL6IP6Q8N6S5 226 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 ZNF680Q8NEM1 530 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 TMEM167BQ9NRX6 74 aa11.11□□□□□ -0.63
LINC00339-207ENST00000634712 GOLT1AQ6ZVE7 132 aa11.1□□□□□ -0.63
LINC00339-207ENST00000634712 LINC00467Q9BRT7 94 aa11.1□□□□□ -0.63
LINC00339-207ENST00000634712 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
LINC00339-207ENST00000634712 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 GAGE7O76087 117 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 UBE2DNLQ8IWF7 75 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 TMED6Q8WW62 240 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 ST6GAL2Q96JF0 529 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 ARPC5LQ9BPX5 153 aa11.09□□□□□ -0.63
LINC00339-207ENST00000634712 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
LINC00339-207ENST00000634712 K7EQM0 130 aa11.08□□□□□ -0.64
LINC00339-207ENST00000634712 DAZ2Q13117 558 aaKnown RBP11.08□□□□□ -0.64
LINC00339-207ENST00000634712 PRR9Q5T870 116 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms