RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 HYLS1Q96M11 299 aa9.74□□□□□ -0.85
SOX2-OT-246ENST00000628343 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
SOX2-OT-246ENST00000628343 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
SOX2-OT-246ENST00000628343 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 CXorf1O96002 111 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 C1QBP02746 253 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 EMP1P54849 157 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 LGALSLQ3ZCW2 172 aaPredicted RBP9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 TMEM78Q5T7P6 136 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 AKAP14Q86UN6 197 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 Q8TAT8 98 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 PHLDA1Q8WV24 401 aaPredicted RBP9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 LINC01587Q99440 93 aa9.73□□□□□ -0.85
SOX2-OT-246ENST00000628343 TMEM189A5PLL7 270 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 NUPR2A6NF83 97 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 KLLNB2CW77 178 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 DIRC3C9JPN6 131 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 PFDN1O60925 122 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 SEC11BP0C7V7 166 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 AZU1P20160 251 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 FHITP49789 147 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 CEMP1Q6PRD7 247 aaPredicted RBP9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 ZNF767PQ75MW2 155 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 ZNF492Q9P255 531 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 RPH3ALQ9UNE2 315 aa9.72□□□□□ -0.85
SOX2-OT-246ENST00000628343 KMT2CQ8NEZ4 4911 aaKnown RBP9.71□□□□□ -0.85
SOX2-OT-246ENST00000628343 TRAV12-3A0A0B4J271 114 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 PLAC8L1A1L4L8 177 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 H7BYZ3 331 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 SLC25A5P05141 298 aaKnown RBP9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 CRISP2P16562 243 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 ZNF138P52744 262 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 FGF8P55075 233 aaPredicted RBP9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 TAS2R60P59551 318 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 GNG5P63218 68 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 BTN1A1Q13410 526 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 FAM74A1Q5RGS3 127 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 PRR9Q5T870 116 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 Q6ZTC4 211 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 IQCF2Q8IXL9 164 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 CMTM2Q8TAZ6 248 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 TMPRSS5Q9H3S3 457 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 TMEM167BQ9NRX6 74 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 DKK2Q9UBU2 259 aa9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 YTHDF2Q9Y5A9 579 aaKnown RBP9.71□□□□□ -0.86
SOX2-OT-246ENST00000628343 C7orf71A4D174 169 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 SPART-AS1P0CW21 52 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 HTN1P15515 57 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 FAM222AQ5U5X8 452 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 GOLT1AQ6ZVE7 132 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 ARL6IP6Q8N6S5 226 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 STOML3Q8TAV4 291 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
SOX2-OT-246ENST00000628343 ZNF324O75467 553 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 NMBP08949 121 aa9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 RNASE4P34096 147 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 EIF5AP63241 154 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 Q6ZQT7 251 aa9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 C5orf17Q8NAS9 161 aa9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 TMED6Q8WW62 240 aa9.69□□□□□ -0.86
SOX2-OT-246ENST00000628343 TRAV8-1A0A0A6YYK1 113 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 UMAD1C9J7I0 102 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 GPX1P07203 203 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 SUMO1P63165 101 aaKnown RBP9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 NIPSNAP3BQ9BS92 247 aa9.68□□□□□ -0.86
SOX2-OT-246ENST00000628343 TEX48A0A1B0GUV7 120 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 C11orf94C9JXX5 98 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 TCRAP04437 139 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 UBE2G2P60604 165 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 C9orf62Q8N4C0 152 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 PYGO2Q9BRQ0 406 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 EPDR1Q9UM22 224 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
SOX2-OT-246ENST00000628343 TRAV10A0A0B4J240 114 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 LCE6AA0A183 80 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 TVP23CQ96ET8 276 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
SOX2-OT-246ENST00000628343 SERTM2A0A1B0GWG4 89 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 LYRM9A8MSI8 78 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
SOX2-OT-246ENST00000628343 ZFP69Q49AA0 526 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms