RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PPT1P50897 306 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 BLOC1S1P78537 153 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 C1orf158Q8N1D5 194 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 ZNF738Q8NE65 137 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
SCAMP4-213ENST00000621748 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 TRAV10A0A0B4J240 114 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 SMIM9A6NGZ8 99 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 H3BQ15 152 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 EIF3GO75821 320 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 CNN1P51911 297 aaKnown RBP12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 TCTAP57738 103 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 FXYD5Q96DB9 178 aa12.87□□□□□ -0.35
SCAMP4-213ENST00000621748 FHITP49789 147 aa12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 EMP1P54849 157 aa12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 RANP62826 216 aaKnown RBP12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 MBD3L1Q8WWY6 194 aa12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 ZNF331Q9NQX6 463 aaPredicted RBP12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 GOLT1BQ9Y3E0 138 aa12.86□□□□□ -0.35
SCAMP4-213ENST00000621748 A0A1B0GV50 99 aa12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 DUSP14O95147 198 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 PRB4P10163 310 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 RAB14P61106 215 aa12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 PSG3Q16557 428 aa12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 PPP1R14DQ9NXH3 145 aa12.85□□□□□ -0.35
SCAMP4-213ENST00000621748 M0R2Z0 102 aa12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 IFNA1P01562 189 aa12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 SPINK13Q1W4C9 94 aa12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 RXFP4Q8TDU9 374 aa12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 SAT2Q96F10 170 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 NKX6-2Q9C056 277 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-213ENST00000621748 IGHV4-4A0A075B6R2 117 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 DEFB131BA0A096LNP1 70 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 TMEM189A5PLL7 270 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 SPART-AS1P0CW21 52 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 ICAM4Q14773 271 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 OR8A1Q8NGG7 326 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 OR10J6PQ8NGY7 276 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
SCAMP4-213ENST00000621748 PGPA6NDG6 321 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 PRM2P04554 102 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 SSX7Q7RTT5 188 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 ZNF680Q8NEM1 530 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 MRPL53Q96EL3 112 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 ZNF503Q96F45 646 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 Q9H3A6 140 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
SCAMP4-213ENST00000621748 LOC102723971A0A1B0GUV8 181 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 K7EQM0 130 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 SLC17A3O00476 420 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 AMBPP02760 352 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 UBE2G2P60604 165 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 HIST1H1AQ02539 215 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 FAM222AQ5U5X8 452 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 CST9LP1Q5W188 147 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 TMEM208Q9BTX3 173 aa12.81□□□□□ -0.36
SCAMP4-213ENST00000621748 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 A0A1W2PRE2 83 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 NDUFB4O95168 129 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 SLC25A5P05141 298 aaKnown RBP12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 TMPRSS5Q9H3S3 457 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 GNG13Q9P2W3 67 aa12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 YTHDF2Q9Y5A9 579 aaKnown RBP12.8□□□□□ -0.36
SCAMP4-213ENST00000621748 ZNF705GA8MUZ8 300 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-213ENST00000621748 F6UZH7 168 aa12.79□□□□□ -0.36
SCAMP4-213ENST00000621748 INSP01308 110 aa12.79□□□□□ -0.36
SCAMP4-213ENST00000621748 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
SCAMP4-213ENST00000621748 TAGLN2P37802 199 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-213ENST00000621748 SUMO1P63165 101 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-213ENST00000621748 SUN5Q8TC36 379 aa12.78□□□□□ -0.36
SCAMP4-213ENST00000621748 NIPSNAP3BQ9BS92 247 aa12.78□□□□□ -0.36
SCAMP4-213ENST00000621748 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
SCAMP4-213ENST00000621748 PRAC2D3DTV9 90 aa12.77□□□□□ -0.37
SCAMP4-213ENST00000621748 TMEM78Q5T7P6 136 aa12.77□□□□□ -0.37
SCAMP4-213ENST00000621748 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
SCAMP4-213ENST00000621748 C5orf17Q8NAS9 161 aa12.77□□□□□ -0.37
SCAMP4-213ENST00000621748 TEX48A0A1B0GUV7 120 aa12.76□□□□□ -0.37
SCAMP4-213ENST00000621748 SERTM2A0A1B0GWG4 89 aa12.76□□□□□ -0.37
SCAMP4-213ENST00000621748 PAGE4O60829 102 aa12.76□□□□□ -0.37
SCAMP4-213ENST00000621748 AZU1P20160 251 aa12.76□□□□□ -0.37
SCAMP4-213ENST00000621748 NDUFAF3Q9BU61 184 aa12.76□□□□□ -0.37
SCAMP4-213ENST00000621748 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
SCAMP4-213ENST00000621748 M0R3E3 92 aa12.75□□□□□ -0.37
SCAMP4-213ENST00000621748 TXNDC17Q9BRA2 123 aa12.75□□□□□ -0.37
SCAMP4-213ENST00000621748 TCEAL7Q9BRU2 100 aa12.75□□□□□ -0.37
SCAMP4-213ENST00000621748 DNAH2Q9P225 4427 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms