RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 TPST1O60507 370 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 CD14P08571 375 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 PCBD1P61457 104 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 COPZ1P61923 177 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 RRAS2P62070 204 aaPredicted RBP2.35□□□□□ -2.03
RFC3-203ENST00000616236 ZNF833PQ6ZTB9 187 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 TEN1Q86WV5 123 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 LINC00269Q8N2A0 174 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 FAM19A2Q8N3H0 131 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 C1orf54Q8WWF1 131 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 DNAJC15Q9Y5T4 150 aa2.35□□□□□ -2.03
RFC3-203ENST00000616236 MYH13Q9UKX3 1938 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 LINC00587B1AMM8 73 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 F8W036 122 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 NPFFO15130 113 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 GNG7O60262 68 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 CXCL8P10145 99 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 SPCS2Q15005 226 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 C10orf55Q5SWW7 151 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 GLIPR1L1Q6UWM5 242 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 RPS19BP1Q86WX3 136 aaKnown RBP2.34□□□□□ -2.03
RFC3-203ENST00000616236 ARL11Q969Q4 196 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 TMEM106BQ9NUM4 274 aa2.34□□□□□ -2.03
RFC3-203ENST00000616236 SOX21Q9Y651 276 aaPredicted RBP2.34□□□□□ -2.03
RFC3-203ENST00000616236 PHLPP1O60346 1717 aa2.34□□□□□ -2.04
RFC3-203ENST00000616236 KDM6AO15550 1401 aaPredicted RBP2.34□□□□□ -2.04
RFC3-203ENST00000616236 ARHGAP31Q2M1Z3 1444 aa2.34□□□□□ -2.04
RFC3-203ENST00000616236 TRBV6-8A0A0A6YYG3 113 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 C3orf85A0A1B0GTC6 90 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 ZNF670-ZNF695F2Z2N8 137 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 NCR2O95944 276 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 CD3DP04234 171 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 OR10AC1Q8NH08 325 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 OTOSQ8NHW6 89 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 NAA38Q9BRA0 125 aaKnown RBP2.33□□□□□ -2.04
RFC3-203ENST00000616236 LINC00470Q9BZP3 86 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 METTL1Q9UBP6 276 aaKnown RBP2.33□□□□□ -2.04
RFC3-203ENST00000616236 CACNA1GO43497 2377 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 COL5A3P25940 1745 aaPredicted RBP2.33□□□□□ -2.04
RFC3-203ENST00000616236 IBTKQ9P2D0 1353 aaPredicted RBP2.33□□□□□ -2.04
RFC3-203ENST00000616236 LAMB4A4D0S4 1761 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 LAMB2P55268 1798 aa2.33□□□□□ -2.04
RFC3-203ENST00000616236 LOC107984156A0A0G2JMH3 177 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 M0R129 80 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
RFC3-203ENST00000616236 CKS2P33552 79 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 SELENOWP63302 87 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 CLLU1Q5K131 121 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 TEX261Q6UWH6 196 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 GKN2Q86XP6 184 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 ARL17AQ8IVW1 177 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 C10orf111Q8N326 155 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 MYH7P12883 1935 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 FREM3P0C091 2139 aa2.32□□□□□ -2.04
RFC3-203ENST00000616236 HELZP42694 1942 aaKnown RBP2.31□□□□□ -2.04
RFC3-203ENST00000616236 DLEU1O43261 78 aa2.31□□□□□ -2.04
RFC3-203ENST00000616236 ETV6P41212 452 aa2.31□□□□□ -2.04
RFC3-203ENST00000616236 CNBPP62633 177 aaKnown RBP2.31□□□□□ -2.04
RFC3-203ENST00000616236 REG4Q9BYZ8 158 aa2.31□□□□□ -2.04
RFC3-203ENST00000616236 SLC35B3Q9H1N7 401 aa2.31□□□□□ -2.04
RFC3-203ENST00000616236 LSM2Q9Y333 95 aaKnown RBP2.31□□□□□ -2.04
RFC3-203ENST00000616236 MUC4Q99102 2169 aa2.31□□□□□ -2.04
RFC3-203ENST00000616236 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.31□□□□□ -2.04
RFC3-203ENST00000616236 FOCADQ5VW36 1801 aa2.31□□□□□ -2.04
RFC3-203ENST00000616236 PTPRFP10586 1907 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 ALPK2Q86TB3 2170 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 PNMA8CA0A1B0GUJ8 204 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 ZNF736B4DX44 427 aaPredicted RBP2.3□□□□□ -2.04
RFC3-203ENST00000616236 HYPMO75409 117 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 DEFB103AP81534 67 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 CASC2Q6XLA1 102 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 FOXI2Q6ZQN5 318 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 ZCCHC23Q6ZST2 131 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 C4orf3Q8WVX3 66 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 MPC1Q9Y5U8 109 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 RGS12O14924 1447 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 WDR7Q9Y4E6 1490 aa2.3□□□□□ -2.04
RFC3-203ENST00000616236 MYOFQ9NZM1 2061 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 TRPM7Q96QT4 1865 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 PTPRGP23470 1445 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 ROCK2O75116 1388 aaKnown RBP2.29□□□□□ -2.04
RFC3-203ENST00000616236 IGHV1-24A0A0C4DH33 117 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 EDF1O60869 148 aaKnown RBP2.29□□□□□ -2.04
RFC3-203ENST00000616236 EMX2Q04743 252 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 Q8N2B8 174 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 CIB3Q96Q77 187 aaPredicted RBP2.29□□□□□ -2.04
RFC3-203ENST00000616236 C2orf88Q9BSF0 95 aa2.29□□□□□ -2.04
RFC3-203ENST00000616236 BAHCC1Q9P281 2608 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 FGD6Q6ZV73 1430 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 A6NN06 94 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 FAM25AB3EWG3 89 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 FAM25CB3EWG5 89 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 FAM25GB3EWG6 89 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 CCL16O15467 120 aa2.28□□□□□ -2.04
RFC3-203ENST00000616236 RBP4P02753 201 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms