RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 CCDC28AQ8IWP9 274 aa12.93□□□□□ -0.34
IGHV3-41-201ENST00000613121 DYNC2H1Q8NCM8 4307 aaKnown RBP12.93□□□□□ -0.34
IGHV3-41-201ENST00000613121 PGPA6NDG6 321 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 SLC25A5P05141 298 aaKnown RBP12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 RXFP4Q8TDU9 374 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 VGLL1Q99990 258 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 SH3BGRL3Q9H299 93 aa12.92□□□□□ -0.34
IGHV3-41-201ENST00000613121 CSMD3Q7Z407 3707 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 RYR3Q15413 4870 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 G3V3Q6 166 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 GPX1P07203 203 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 HTN3P15516 51 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 TCTAP57738 103 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 DAD1P61803 113 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 C16orf74Q96GX8 76 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
IGHV3-41-201ENST00000613121 SACSQ9NZJ4 4579 aa12.9□□□□□ -0.34
IGHV3-41-201ENST00000613121 LINC00476Q8WZB0 136 aa12.9□□□□□ -0.34
IGHV3-41-201ENST00000613121 RPH3ALQ9UNE2 315 aa12.9□□□□□ -0.34
IGHV3-41-201ENST00000613121 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 C7orf71A4D174 169 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 STAG3L2P0CL84 134 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 STAG3L3P0CL85 134 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 ARL14EPLP0DKL9 152 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 ZNF138P52744 262 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 ZNF493Q6ZR52 646 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
IGHV3-41-201ENST00000613121 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 LYRM9A8MSI8 78 aa12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 CD300CQ08708 224 aa12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 ARPC5LQ9BPX5 153 aa12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 TIMM8BQ9Y5J9 83 aaPredicted RBP12.88□□□□□ -0.35
IGHV3-41-201ENST00000613121 RBAKDNA6NC62 111 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 CXorf1O96002 111 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 GCHFRP30047 84 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 BTN1A1Q13410 526 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 FAM19A4Q96LR4 140 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 PYGO2Q9BRQ0 406 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 APLNQ9ULZ1 77 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
IGHV3-41-201ENST00000613121 HMSDA8MTL9 139 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 KLLNB2CW77 178 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 NMBP08949 121 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 CRISP2P16562 243 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 Q8TAT8 98 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 NOP10Q9NPE3 64 aaKnown RBP12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 CYTL1Q9NRR1 136 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 TMEM167BQ9NRX6 74 aa12.86□□□□□ -0.35
IGHV3-41-201ENST00000613121 RYR2Q92736 4967 aa12.85□□□□□ -0.35
IGHV3-41-201ENST00000613121 A0A0D9SG52 128 aa12.85□□□□□ -0.35
IGHV3-41-201ENST00000613121 CBY3A6NI87 242 aa12.85□□□□□ -0.35
IGHV3-41-201ENST00000613121 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
IGHV3-41-201ENST00000613121 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
IGHV3-41-201ENST00000613121 NDUFAF3Q9BU61 184 aa12.85□□□□□ -0.35
IGHV3-41-201ENST00000613121 KANTRA0A1W2PQU2 76 aa12.84□□□□□ -0.35
IGHV3-41-201ENST00000613121 PLAC8L1A1L4L8 177 aa12.84□□□□□ -0.35
IGHV3-41-201ENST00000613121 ZNF324O75467 553 aaPredicted RBP12.84□□□□□ -0.35
IGHV3-41-201ENST00000613121 GOLT1AQ6ZVE7 132 aa12.84□□□□□ -0.35
IGHV3-41-201ENST00000613121 OR11H4Q8NGC9 324 aa12.84□□□□□ -0.35
IGHV3-41-201ENST00000613121 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
IGHV3-41-201ENST00000613121 TRBV7-9A0A0J9YWB2 115 aa12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 RGS13O14921 159 aa12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 SUMO1P63165 101 aaKnown RBP12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 ZNF345Q14585 488 aa12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 ST6GAL2Q96JF0 529 aa12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 ZNF471Q9BX82 626 aaPredicted RBP12.83□□□□□ -0.36
IGHV3-41-201ENST00000613121 PFDN1O60925 122 aa12.82□□□□□ -0.36
IGHV3-41-201ENST00000613121 GNG5P63218 68 aa12.82□□□□□ -0.36
IGHV3-41-201ENST00000613121 SSX7Q7RTT5 188 aa12.82□□□□□ -0.36
IGHV3-41-201ENST00000613121 EIF4E3Q8N5X7 224 aaKnown RBP12.82□□□□□ -0.36
IGHV3-41-201ENST00000613121 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
IGHV3-41-201ENST00000613121 F5H768 121 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 K7EQM0 130 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 ATP5G1P05496 136 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 ATP5G3P48201 142 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 PRR9Q5T870 116 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 ZNF680Q8NEM1 530 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 SUN5Q8TC36 379 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 FAM210BQ96KR6 192 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 LYSTQ99698 3801 aa12.81□□□□□ -0.36
IGHV3-41-201ENST00000613121 IGHV1OR15-1A0A075B7D0 117 aa12.8□□□□□ -0.36
IGHV3-41-201ENST00000613121 GAGE12BA1L429 117 aa12.8□□□□□ -0.36
IGHV3-41-201ENST00000613121 GAGE7O76087 117 aa12.8□□□□□ -0.36
IGHV3-41-201ENST00000613121 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
IGHV3-41-201ENST00000613121 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms