RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 MBD3L5A6NJ08 208 aaPredicted RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 NPYP01303 97 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 CGB3P0DN86 165 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 CGB7P0DN87 165 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 CTRLP40313 264 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 PLP1P60201 277 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 RHOGP84095 191 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 COX19Q49B96 90 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 TMEM97Q5BJF2 176 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 BVES-AS1Q5T3Y7 98 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 FAM74A4Q5TZK3 123 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 MBD3L2Q8NHZ7 208 aaPredicted RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 LINC00477Q96M19 166 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 JMJD8Q96S16 334 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 ZNF462Q96JM2 2506 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 UTP20O75691 2785 aaKnown RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 LOC107984156A0A0G2JMH3 177 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 A1L4Q6 167 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 SH2D1AO60880 128 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 IGKV1-17P01599 117 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 APOBEC3AP31941 199 aaPredicted RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 CEACAM3P40198 252 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 EFNA4P52798 201 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 MEF2CQ06413 473 aaPredicted RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 SMAGPQ0VAQ4 97 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 HIST2H2BDQ6DRA6 164 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 BRD3OSQ6XYD6 125 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 ARL17AQ8IVW1 177 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 GTSF1LQ9H1H1 148 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 GEMIN7Q9H840 131 aaKnown RBP5.12□□□□□ -1.59
RPF2-204ENST00000607388 SPCS1Q9Y6A9 102 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 CSMD2Q7Z408 3487 aa5.12□□□□□ -1.59
RPF2-204ENST00000607388 LOC105371242A0A075B767 164 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 IGLC1P0CG04 106 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 LGALS7P47929 136 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 ZNF672Q499Z4 452 aaPredicted RBP5.11□□□□□ -1.59
RPF2-204ENST00000607388 ZNF833PQ6ZTB9 187 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 C21orf62Q9NYP8 219 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 PRAC2D3DTV9 90 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 BUB1B-PAK6H3BSN5 160 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 H3BVH4 76 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 THBDP07204 575 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 KIR3DS1Q14943 382 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 SCGB1D4Q6XE38 83 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 FER1L6-AS1Q8NA97 138 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 FAM57AQ8TBR7 257 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 FMC1Q96HJ9 113 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 NDFIP1Q9BT67 221 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 C19orf24Q9BVV8 132 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 SIGLEC8Q9NYZ4 499 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 FAM90A9PA6NNJ1 464 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 APOMO95445 188 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 ORMDL3Q8N138 153 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 WIPF2Q8TF74 440 aaPredicted RBP5.11□□□□□ -1.59
RPF2-204ENST00000607388 TIMD4Q96H15 378 aa5.11□□□□□ -1.59
RPF2-204ENST00000607388 TRAV9-1A0A075B6T8 112 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 TAX1BP3O14907 124 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 RPL7P18124 248 aaKnown RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 OCIAD2Q56VL3 154 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 GTF2H5Q6ZYL4 71 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 ZNF418Q8TF45 676 aaPredicted RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 NEU4Q8WWR8 484 aaPredicted RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 TRAV40A0A0B4J280 105 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 F6UB75 175 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 K7ERU9 68 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 TOMM40O96008 361 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 LTAP01374 205 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 IGLV2-23P01705 113 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 MFAP4P55083 255 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 LY6DQ14210 128 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 C15orf32Q32M92 178 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 MRPL51Q4U2R6 128 aaKnown RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 ZC2HC1BQ5TFG8 222 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 IL17RELQ6ZVW7 336 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 MRPL27Q9P0M9 148 aaKnown RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 DPM3Q9P2X0 92 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 LINC01548A6NM66 108 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 GP9P14770 177 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 ZNF80P51504 273 aaPredicted RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 PSG3Q16557 428 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 OR1N2Q8NGR9 330 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 OR2K2Q8NGT1 345 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 TMEM158Q8WZ71 300 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 C16orf92Q96LL3 132 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 HIST1H4GQ99525 98 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 VKORC1Q9BQB6 163 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 OTORQ9NRC9 128 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 YAE1D1Q9NRH1 226 aa5.1□□□□□ -1.59
RPF2-204ENST00000607388 BEX4Q9NWD9 120 aaPredicted RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 TNRC6BQ9UPQ9 1833 aaKnown RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 FLNBO75369 2602 aaKnown RBP5.1□□□□□ -1.59
RPF2-204ENST00000607388 A0A0G2JLM5 398 aa5.09□□□□□ -1.59
RPF2-204ENST00000607388 NBR2O15453 112 aa5.09□□□□□ -1.59
RPF2-204ENST00000607388 CRIP1P50238 77 aa5.09□□□□□ -1.59
RPF2-204ENST00000607388 SRSF9Q13242 221 aaKnown RBP eCLIP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms