RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 LYPD1Q8N2G4 141 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 KCNRGQ8N5I3 272 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 CMTM2Q8TAZ6 248 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 VGLL1Q99990 258 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 OTORQ9NRC9 128 aa9.19□□□□□ -0.94
USE1-209ENST00000601592 A0A0D9SG52 128 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 LCE6AA0A183 80 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 HMSDA8MTL9 139 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 PFDN1O60925 122 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 GCHFRP30047 84 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 C12orf74Q32Q52 190 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 C9orf47Q6ZRZ4 202 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 Q8TAT8 98 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 NIPSNAP3BQ9BS92 247 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 ZNF471Q9BX82 626 aaPredicted RBP9.18□□□□□ -0.94
USE1-209ENST00000601592 CYTL1Q9NRR1 136 aa9.18□□□□□ -0.94
USE1-209ENST00000601592 TRAV10A0A0B4J240 114 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 C7orf71A4D174 169 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 C11orf94C9JXX5 98 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 H7BYZ3 331 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 CXorf1O96002 111 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 SLC25A5P05141 298 aaKnown RBP9.17□□□□□ -0.94
USE1-209ENST00000601592 GPX1P07203 203 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 AZU1P20160 251 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 RNASE4P34096 147 aaKnown RBP9.17□□□□□ -0.94
USE1-209ENST00000601592 TAS2R60P59551 318 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 BTN1A1Q13410 526 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 Q6ZNX1 250 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 SSX7Q7RTT5 188 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 RXFP4Q8TDU9 374 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 C2CD4CQ8TF44 421 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 C20orf144Q9BQM9 153 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
USE1-209ENST00000601592 KMT2CQ8NEZ4 4911 aaKnown RBP9.16□□□□□ -0.94
USE1-209ENST00000601592 CTXND1A0A1B0GTU2 59 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 IGLL5B9A064 214 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 BCL2L11O43521 198 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 HTN3P15516 51 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 ZNF138P52744 262 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 DAD1P61803 113 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 GOLT1AQ6ZVE7 132 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 C16orf74Q96GX8 76 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 ST6GAL2Q96JF0 529 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 ZNF492Q9P255 531 aa9.16□□□□□ -0.94
USE1-209ENST00000601592 DYNC2H1Q8NCM8 4307 aaKnown RBP9.16□□□□□ -0.94
USE1-209ENST00000601592 DEFB131BA0A096LNP1 70 aa9.15□□□□□ -0.94
USE1-209ENST00000601592 FGF8P55075 233 aaPredicted RBP9.15□□□□□ -0.94
USE1-209ENST00000601592 GNG5P63218 68 aa9.15□□□□□ -0.94
USE1-209ENST00000601592 CD300CQ08708 224 aa9.15□□□□□ -0.94
USE1-209ENST00000601592 ZNF726P1Q15940 193 aa9.15□□□□□ -0.94
USE1-209ENST00000601592 TMUB2Q71RG4 321 aa9.15□□□□□ -0.94
USE1-209ENST00000601592 RBAKDNA6NC62 111 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 MAP1LC3B2A6NCE7 125 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 KLLNB2CW77 178 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 LY6G6CO95867 125 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 CRISP2P16562 243 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 TCTE3Q8IZS6 198 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 TMEM263Q8WUH6 116 aaKnown RBP9.14□□□□□ -0.95
USE1-209ENST00000601592 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 MAP1LC3BQ9GZQ8 125 aa9.14□□□□□ -0.95
USE1-209ENST00000601592 LYRM9A8MSI8 78 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 UBE2G2P60604 165 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 EIF5AP63241 154 aaKnown RBP9.13□□□□□ -0.95
USE1-209ENST00000601592 PRR9Q5T870 116 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 AKAP14Q86UN6 197 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 RNASE8Q8TDE3 154 aaKnown RBP9.13□□□□□ -0.95
USE1-209ENST00000601592 TMPRSS5Q9H3S3 457 aa9.13□□□□□ -0.95
USE1-209ENST00000601592 TIMM8BQ9Y5J9 83 aaPredicted RBP9.13□□□□□ -0.95
USE1-209ENST00000601592 TRAV8-1A0A0A6YYK1 113 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 CBY3A6NI87 242 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 SNURFLB1AK76 121 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 RGS13O14921 159 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 NMBP08949 121 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 SUMO1P63165 101 aaKnown RBP9.12□□□□□ -0.95
USE1-209ENST00000601592 STOML3Q8TAV4 291 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 FAM213BQ8TBF2 198 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 TMED6Q8WW62 240 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 SGK494Q96LW2 274 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 NOP10Q9NPE3 64 aaKnown RBP9.12□□□□□ -0.95
USE1-209ENST00000601592 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
USE1-209ENST00000601592 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 GGTLC3B5MD39 225 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 K7EQM0 130 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 IFNA7P01567 189 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 C1QBP02746 253 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms