RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 LGALS9BQ3B8N2 356 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 TMEM88Q6PEY1 159 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 PHYHIPLQ96FC7 376 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 PSMG3Q9BT73 122 aaPredicted RBP13.27□□□□□ -0.29
PNKP-213ENST00000599543 PPP1R14DQ9NXH3 145 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 IGLV2-18A0A075B6J9 118 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 LYRM9A8MSI8 78 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 NBEAP1P0C6P0 100 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 SSX7Q7RTT5 188 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 OR2G3Q8NGZ4 309 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 KIAA1109Q2LD37 5005 aa13.26□□□□□ -0.29
PNKP-213ENST00000599543 HMSDA8MTL9 139 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 RTL8CO15255 209 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 PRM2P04554 102 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 TSPOP30536 169 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 CDC34P49427 236 aaPredicted RBP13.25□□□□□ -0.29
PNKP-213ENST00000599543 ICAM4Q14773 271 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 RNF212Q495C1 297 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 KHDC3LQ587J8 217 aa13.25□□□□□ -0.29
PNKP-213ENST00000599543 A0A1B0GVY2 172 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 TAAR5O14804 337 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 TAS2R45P59539 299 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 RANP62826 216 aaKnown RBP13.24□□□□□ -0.29
PNKP-213ENST00000599543 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 TMEM256Q8N2U0 113 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 C15orf53Q8NAA6 179 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 GNPNAT1Q96EK6 184 aaPredicted RBP13.24□□□□□ -0.29
PNKP-213ENST00000599543 KRTAP17-1Q9BYP8 105 aa13.24□□□□□ -0.29
PNKP-213ENST00000599543 BCL2L11O43521 198 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 ZNF253O75346 499 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 ARL14EPLP0DKL9 152 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 DEFB130BP0DP73 79 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 DEFB130AP0DP74 79 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 ERCC8Q13216 396 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 ZNF345Q14585 488 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 TMUB2Q71RG4 321 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 RAB24Q969Q5 203 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 LINC01587Q99440 93 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 ZNF471Q9BX82 626 aaPredicted RBP13.23□□□□□ -0.29
PNKP-213ENST00000599543 DNAH17Q9UFH2 4485 aa13.23□□□□□ -0.29
PNKP-213ENST00000599543 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
PNKP-213ENST00000599543 J3KRW8 73 aa13.22□□□□□ -0.29
PNKP-213ENST00000599543 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
PNKP-213ENST00000599543 SERF2P84101 59 aa13.22□□□□□ -0.29
PNKP-213ENST00000599543 OR10J6PQ8NGY7 276 aa13.22□□□□□ -0.29
PNKP-213ENST00000599543 A0A0D9SG52 128 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 KANTRA0A1W2PQU2 76 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 PFDN1O60925 122 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 HTN1P15515 57 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 CDKN1BP46527 198 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 TAS2R60P59551 318 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 PDE6HQ13956 83 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 KIR3DS1Q14943 382 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 ZNF726P1Q15940 193 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 Q6ZR54 194 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 Q9H3A6 140 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 AAMDCQ9H7C9 122 aa13.21□□□□□ -0.29
PNKP-213ENST00000599543 PLAC8L1A1L4L8 177 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 MBP02144 154 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 AZU1P20160 251 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 LGALSLQ3ZCW2 172 aaPredicted RBP13.2□□□□□ -0.3
PNKP-213ENST00000599543 AKR1C8PQ5T2L2 129 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 IQCF2Q8IXL9 164 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 HYLS1Q96M11 299 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 ATG101Q9BSB4 218 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
PNKP-213ENST00000599543 RPH3ALQ9UNE2 315 aa13.2□□□□□ -0.3
PNKP-213ENST00000599543 PKD1P98161 4303 aa13.19□□□□□ -0.3
PNKP-213ENST00000599543 F5H768 121 aa13.19□□□□□ -0.3
PNKP-213ENST00000599543 C1QBP02746 253 aa13.19□□□□□ -0.3
PNKP-213ENST00000599543 STAG3L2P0CL84 134 aa13.19□□□□□ -0.3
PNKP-213ENST00000599543 STAG3L3P0CL85 134 aa13.19□□□□□ -0.3
PNKP-213ENST00000599543 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
PNKP-213ENST00000599543 FAM3BP58499 235 aaPredicted RBP13.19□□□□□ -0.3
PNKP-213ENST00000599543 PCLOQ9Y6V0 5065 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 ATP5G1P05496 136 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 GCHFRP30047 84 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 ATP5G3P48201 142 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 FGF8P55075 233 aaPredicted RBP13.18□□□□□ -0.3
PNKP-213ENST00000599543 PQLC2Q6ZP29 291 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
PNKP-213ENST00000599543 VGLL1Q99990 258 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 PRELID1Q9Y255 219 aa13.18□□□□□ -0.3
PNKP-213ENST00000599543 MED14OSP0DP75 135 aa13.17□□□□□ -0.3
PNKP-213ENST00000599543 FHITP49789 147 aa13.17□□□□□ -0.3
PNKP-213ENST00000599543 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
PNKP-213ENST00000599543 AGPAT4-IT1Q9H0P7 198 aa13.17□□□□□ -0.3
PNKP-213ENST00000599543 TMPRSS5Q9H3S3 457 aa13.17□□□□□ -0.3
PNKP-213ENST00000599543 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
PNKP-213ENST00000599543 PGPA6NDG6 321 aa13.16□□□□□ -0.3
PNKP-213ENST00000599543 CBY3A6NI87 242 aa13.16□□□□□ -0.3
PNKP-213ENST00000599543 H7BYZ3 331 aa13.16□□□□□ -0.3
PNKP-213ENST00000599543 NUDT3O95989 172 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms