RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	FAM122C	Q6P4D5	195 aa		10.36	□□□□□ -0.75
IRF3-223	ENST00000599223	CYP2G1P	Q6ZSU1	146 aa		10.36	□□□□□ -0.75
IRF3-223	ENST00000599223	C16orf92	Q96LL3	132 aa		10.36	□□□□□ -0.75
IRF3-223	ENST00000599223	TRAV1-1	A0A0B4J248	108 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	MAP1LC3B2	A6NCE7	125 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223		M0R2Z0	102 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	CDC34	P49427	236 aa	Predicted RBP	10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	CNN1	P51911	297 aa	Known RBP	10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	RHOB	P62745	196 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	PEA15	Q15121	130 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	SPINK13	Q1W4C9	94 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	MIC13	Q5XKP0	118 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	RNF182	Q8N6D2	247 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	OR1L4	Q8NGR5	311 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	LYPD6B	Q8NI32	183 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	IGF2BP2-AS1	Q96M15	143 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	PFDN5	Q99471	154 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	MAP1LC3B	Q9GZQ8	125 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	TREM1	Q9NP99	234 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	SLC45A2	Q9UMX9	530 aa		10.35	□□□□□ -0.75
IRF3-223	ENST00000599223	PLAC8L1	A1L4L8	177 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	KRBOX1	C9JBD0	128 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	PRB4	P10163	310 aa	Predicted RBP	10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	GALR1	P47211	349 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	MEOX2	P50222	304 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	PPT1	P50897	306 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	DAD1	P61803	113 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	RNF212	Q495C1	297 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	LCN15	Q6UWW0	184 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	S100A7A	Q86SG5	101 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	BPIFC	Q8NFQ6	507 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	MBD3L1	Q8WWY6	194 aa		10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	EIF5A2	Q9GZV4	153 aa	Known RBP	10.34	□□□□□ -0.75
IRF3-223	ENST00000599223	APOB	P04114	4563 aa	Known RBP	10.33	□□□□□ -0.76
IRF3-223	ENST00000599223		A0A1B0GV50	99 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	COX7A2P2	O60397	106 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	ORM2	P19652	201 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	TAGLN2	P37802	199 aa	Known RBP	10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	TAS2R45	P59539	299 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	SAMD13	Q5VXD3	122 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	TMEM208	Q9BTX3	173 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	SMDT1	Q9H4I9	107 aa		10.33	□□□□□ -0.76
IRF3-223	ENST00000599223	TRAV12-2	A0A075B6T6	113 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223		H3BRN7	92 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	INS	P01308	110 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	LINC00869	P0C866	280 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	S100A7	P31151	101 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	GUK1	Q16774	197 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	IQCF2	Q8IXL9	164 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	OR1B1	Q8NGR6	318 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	RAB24	Q969Q5	203 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	FAM210A	Q96ND0	272 aa		10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	MRPL32	Q9BYC8	188 aa	Known RBP	10.32	□□□□□ -0.76
IRF3-223	ENST00000599223	CXorf1	O96002	111 aa		10.31	□□□□□ -0.76
IRF3-223	ENST00000599223	AZU1	P20160	251 aa		10.31	□□□□□ -0.76
IRF3-223	ENST00000599223	C1orf134	Q5TEV5	83 aa		10.31	□□□□□ -0.76
IRF3-223	ENST00000599223	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.31	□□□□□ -0.76
IRF3-223	ENST00000599223	MANBAL	Q9NQG1	85 aa		10.31	□□□□□ -0.76
IRF3-223	ENST00000599223	RBFOX3	A6NFN3	312 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	DEFB130B	P0DP73	79 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	DEFB130A	P0DP74	79 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	TNP2	Q05952	138 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	TOR2A	Q5JU69	321 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	C10orf113	Q5VZT2	155 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	UHRF2	Q96PU4	802 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	SHANK2-AS3	Q9BTD1	123 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	DNAJC4	Q9NNZ3	241 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	GNG13	Q9P2W3	67 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	FUT9	Q9Y231	359 aa		10.3	□□□□□ -0.76
IRF3-223	ENST00000599223	HYPM	O75409	117 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	OR5G3	P0C626	314 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	FGF8	P55075	233 aa	Predicted RBP	10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	ZNF726P1	Q15940	193 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	KHDC3L	Q587J8	217 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	C15orf53	Q8NAA6	179 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	ZNF738	Q8NE65	137 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	ZNRF2	Q8NHG8	242 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	RNF24	Q9Y225	148 aa		10.29	□□□□□ -0.76
IRF3-223	ENST00000599223	LYRM9	A8MSI8	78 aa		10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	HMGB3	O15347	200 aa	Known RBP	10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	DUSP14	O95147	198 aa	Known RBP	10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	TSPO	P30536	169 aa		10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	HIST1H1A	Q02539	215 aa	Predicted RBP	10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	GCSAML	Q5JQS6	135 aa		10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	SOHLH1	Q5JUK2	328 aa		10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	PQLC2	Q6ZP29	291 aa		10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	GPR82	Q96P67	336 aa		10.28	□□□□□ -0.76
IRF3-223	ENST00000599223	TMEM218	A2RU14	115 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223		F8W036	122 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	STAG3L2	P0CL84	134 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	STAG3L3	P0CL85	134 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	BCL2	P10415	239 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	ZNF506	Q5JVG8	444 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	OR8A1	Q8NGG7	326 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	TMEM167B	Q9NRX6	74 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	VAX2	Q9UIW0	290 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	HIGD1A	Q9Y241	93 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223	DNAH5	Q8TE73	4624 aa		10.27	□□□□□ -0.77
IRF3-223	ENST00000599223		A0A087X0K7	114 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms