RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 TRAV12-3A0A0B4J271 114 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 A0A1W2PPV4 95 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 CBY3A6NI87 242 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 SNURFLB1AK76 121 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 KLLNB2CW77 178 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 ATP5G1P05496 136 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 DEFB130BP0DP73 79 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 DEFB130AP0DP74 79 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 CRISP2P16562 243 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 ATP5G3P48201 142 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 FAM122CQ6P4D5 195 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 PQLC2Q6ZP29 291 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 POM121L12Q8N7R1 296 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 ZNF680Q8NEM1 530 aa12.57□□□□□ -0.4
SHKBP1-204ENST00000594862 RBAKDNA6NC62 111 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 RXFP4Q8TDU9 374 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 PHYHIPLQ96FC7 376 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 AGPAT4-IT1Q9H0P7 198 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
SHKBP1-204ENST00000594862 J3KRW8 73 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 PRM2P04554 102 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 GPX1P07203 203 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 ERCC8Q13216 396 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 UBE2DNLQ8IWF7 75 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 INO80EQ8NBZ0 244 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 OR2G3Q8NGZ4 309 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 PSMG3Q9BT73 122 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 Q9H3A6 140 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
SHKBP1-204ENST00000594862 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 MBP02144 154 aa12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 ZNF138P52744 262 aa12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 RNF212Q495C1 297 aa12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 ARL6IP6Q8N6S5 226 aa12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 ZNF503Q96F45 646 aa12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
SHKBP1-204ENST00000594862 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 SERF2P84101 59 aa12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 LENEPQ9Y5L5 61 aa12.53□□□□□ -0.4
SHKBP1-204ENST00000594862 F5H768 121 aa12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 LINC00612Q8N6U2 182 aa12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 TMED6Q8WW62 240 aa12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 VGLL1Q99990 258 aa12.52□□□□□ -0.41
SHKBP1-204ENST00000594862 BORCS7-ASMTA0A0B4J1R7 106 aa12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 RAB2AP61019 212 aa12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 BTN1A1Q13410 526 aa12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-204ENST00000594862 RGS13O14921 159 aa12.5□□□□□ -0.41
SHKBP1-204ENST00000594862 ZNF324O75467 553 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-204ENST00000594862 CD300CQ08708 224 aa12.5□□□□□ -0.41
SHKBP1-204ENST00000594862 IBA57Q5T440 356 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-204ENST00000594862 OR2T35Q8NGX2 323 aa12.5□□□□□ -0.41
SHKBP1-204ENST00000594862 FXYD6-FXYD2A0A087WZ82 144 aa12.49□□□□□ -0.41
SHKBP1-204ENST00000594862 DIRC3C9JPN6 131 aa12.49□□□□□ -0.41
SHKBP1-204ENST00000594862 ATP6V0CP27449 155 aa12.49□□□□□ -0.41
SHKBP1-204ENST00000594862 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
SHKBP1-204ENST00000594862 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
SHKBP1-204ENST00000594862 SERTM2A0A1B0GWG4 89 aa12.48□□□□□ -0.41
SHKBP1-204ENST00000594862 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
SHKBP1-204ENST00000594862 ATG101Q9BSB4 218 aa12.48□□□□□ -0.41
SHKBP1-204ENST00000594862 IGHV1OR15-1A0A075B7D0 117 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 GAGE7O76087 117 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 ARL14EPLP0DKL9 152 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 TCL1AP56279 114 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 LINC00336Q6ZUF6 198 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 C11orf72Q8NBR9 251 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 Q8TAT8 98 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 HYLS1Q96M11 299 aa12.47□□□□□ -0.41
SHKBP1-204ENST00000594862 RNF222A6NCQ9 220 aa12.46□□□□□ -0.41
SHKBP1-204ENST00000594862 PGPA6NDG6 321 aa12.46□□□□□ -0.41
SHKBP1-204ENST00000594862 H3BNG1 76 aa12.46□□□□□ -0.41
SHKBP1-204ENST00000594862 TAAR5O14804 337 aa12.46□□□□□ -0.41
SHKBP1-204ENST00000594862 LGALS9BQ3B8N2 356 aa12.46□□□□□ -0.41
SHKBP1-204ENST00000594862 Q5BKY6 102 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms