RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 LGALS9CQ6DKI2 356 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 HIST1H2BAQ96A08 127 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
FOXA3-202ENST00000594297 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
FOXA3-202ENST00000594297 SLC17A3O00476 420 aa11.33□□□□□ -0.6
FOXA3-202ENST00000594297 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
FOXA3-202ENST00000594297 ZNF506Q5JVG8 444 aa11.33□□□□□ -0.6
FOXA3-202ENST00000594297 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
FOXA3-202ENST00000594297 FAT2Q9NYQ8 4349 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 PKHD1P08F94 4074 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 LOC102724200A0A096LPH7 203 aaPredicted RBP11.32□□□□□ -0.6
FOXA3-202ENST00000594297 LINC00862A6NCI5 91 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 SOCS3O14543 225 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 NDUFS6O75380 124 aaKnown RBP11.32□□□□□ -0.6
FOXA3-202ENST00000594297 PSMG4Q5JS54 123 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 TREM1Q9NP99 234 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 EPDR1Q9UM22 224 aa11.32□□□□□ -0.6
FOXA3-202ENST00000594297 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 FBLL1A6NHQ2 334 aaKnown RBP11.31□□□□□ -0.6
FOXA3-202ENST00000594297 GGTLC3B5MD39 225 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 S100A9P06702 114 aaKnown RBP11.31□□□□□ -0.6
FOXA3-202ENST00000594297 IGFL4Q6B9Z1 124 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 UQCC3Q6UW78 93 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 COMMD7Q86VX2 200 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
FOXA3-202ENST00000594297 TMEM250H0YL14 139 aa11.3□□□□□ -0.6
FOXA3-202ENST00000594297 DUSP14O95147 198 aaKnown RBP11.3□□□□□ -0.6
FOXA3-202ENST00000594297 ATP5G3P48201 142 aa11.3□□□□□ -0.6
FOXA3-202ENST00000594297 CNN1P51911 297 aaKnown RBP11.3□□□□□ -0.6
FOXA3-202ENST00000594297 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
FOXA3-202ENST00000594297 CYB561D1Q8N8Q1 229 aa11.3□□□□□ -0.6
FOXA3-202ENST00000594297 RARRES2Q99969 163 aa11.3□□□□□ -0.6
FOXA3-202ENST00000594297 DNAH2Q9P225 4427 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 PEX7O00628 323 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 TCRAP04437 139 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 AKR1C3P42330 323 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 DEFB131AP59861 70 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 UBE2G1P62253 170 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 CCDC28AQ8IWP9 274 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
FOXA3-202ENST00000594297 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 TP53TG1Q9Y2A0 90 aa11.29□□□□□ -0.6
FOXA3-202ENST00000594297 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
FOXA3-202ENST00000594297 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 M0R3E3 92 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 SPRY2O43597 315 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 CEBPGP53567 150 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 GOLT1AQ6ZVE7 132 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
FOXA3-202ENST00000594297 ZNF705FA8MVS1 300 aaPredicted RBP11.27□□□□□ -0.61
FOXA3-202ENST00000594297 Q6ZWC4 215 aa11.27□□□□□ -0.61
FOXA3-202ENST00000594297 FAM24BQ8N5W8 94 aa11.27□□□□□ -0.61
FOXA3-202ENST00000594297 EIF4E3Q8N5X7 224 aaKnown RBP11.27□□□□□ -0.61
FOXA3-202ENST00000594297 FMC1Q96HJ9 113 aa11.27□□□□□ -0.61
FOXA3-202ENST00000594297 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
FOXA3-202ENST00000594297 NDFIP1Q9BT67 221 aa11.27□□□□□ -0.61
FOXA3-202ENST00000594297 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 GNG5P63218 68 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 HIST1H1AQ02539 215 aaPredicted RBP11.26□□□□□ -0.61
FOXA3-202ENST00000594297 FAM74A3Q4VXF1 159 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 STHQ8IWL8 128 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 C11orf52Q96A22 123 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
FOXA3-202ENST00000594297 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
FOXA3-202ENST00000594297 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
FOXA3-202ENST00000594297 APOC4P55056 127 aa11.25□□□□□ -0.61
FOXA3-202ENST00000594297 SOHLH1Q5JUK2 328 aa11.25□□□□□ -0.61
FOXA3-202ENST00000594297 ACTL10Q5JWF8 245 aa11.25□□□□□ -0.61
FOXA3-202ENST00000594297 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
FOXA3-202ENST00000594297 SAV1Q9H4B6 383 aaPredicted RBP11.25□□□□□ -0.61
FOXA3-202ENST00000594297 A0A0J9YX75 114 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 TAS2R60P59551 318 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
FOXA3-202ENST00000594297 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
FOXA3-202ENST00000594297 TMEM183BQ1AE95 376 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 ODF3L2Q3SX64 289 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 SAPCD1Q5SSQ6 148 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 C9orf47Q6ZRZ4 202 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 OR4B1Q8NGF8 309 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 RNF183Q96D59 192 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 DNAH11Q96DT5 4516 aa11.24□□□□□ -0.61
FOXA3-202ENST00000594297 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
FOXA3-202ENST00000594297 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
FOXA3-202ENST00000594297 TSPOP30536 169 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 RPL35P42766 123 aaKnown RBP11.23□□□□□ -0.61
FOXA3-202ENST00000594297 ZNF138P52744 262 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 ZNF674Q2M3X9 581 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 SMIM7Q9BQ49 75 aa11.23□□□□□ -0.61
FOXA3-202ENST00000594297 ZFP30Q9Y2G7 519 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms