RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	MAP1LC3C	Q9BXW4	147 aa		12.01	□□□□□ -0.49
DDX39A-209	ENST00000589318		G3V318	75 aa		12	□□□□□ -0.49
DDX39A-209	ENST00000589318		K7EP34	96 aa		12	□□□□□ -0.49
DDX39A-209	ENST00000589318	LEPROTL1	O95214	131 aa		12	□□□□□ -0.49
DDX39A-209	ENST00000589318	C9orf139	Q6ZV77	190 aa		12	□□□□□ -0.49
DDX39A-209	ENST00000589318	HSPB8	Q9UJY1	196 aa		12	□□□□□ -0.49
DDX39A-209	ENST00000589318		S4R3C0	116 aa		12	□□□□□ -0.49
DDX39A-209	ENST00000589318	FLNA	P21333	2647 aa	Known RBP	12	□□□□□ -0.49
DDX39A-209	ENST00000589318	COX8A	P10176	69 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	SLC35B1	P78383	322 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	BPIFA4P	Q86YQ2	179 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	FAM167A-AS1	Q96KT0	104 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	ZNF48	Q96MX3	618 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	FASN	P49327	2511 aa	Known RBP	11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	COX7A2P2	O60397	106 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	PLP1	P60201	277 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	C5orf17	Q8NAS9	161 aa		11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	MRPL32	Q9BYC8	188 aa	Known RBP	11.99	□□□□□ -0.49
DDX39A-209	ENST00000589318	SAP30	O75446	220 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	IGHV4-59	P01825	116 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	HIST1H1E	P10412	219 aa	Known RBP	11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	MGST1	P10620	155 aa	Known RBP	11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	TMEM97	Q5BJF2	176 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	C10orf113	Q5VZT2	155 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	OR1L4	Q8NGR5	311 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	FOXC2	Q99958	501 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	SLC25A2	Q9BXI2	301 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	HECTD1	Q9ULT8	2610 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	TRAV5	A0A0B4J249	113 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	C8orf88	P0DMB2	117 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	ERAS	Q7Z444	233 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	NUP35	Q8NFH5	326 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	THYN1	Q9P016	225 aa		11.98	□□□□□ -0.49
DDX39A-209	ENST00000589318	FAM231B	A6NCW3	169 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	IGHG2	P01859	326 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	IGF1	P05019	195 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	MFAP4	P55083	255 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318		Q6ZS46	218 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	SPATA12	Q7Z6I5	190 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	ZNF355P	Q9NSJ1	428 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	C21orf62	Q9NYP8	219 aa		11.97	□□□□□ -0.49
DDX39A-209	ENST00000589318	TLN2	Q9Y4G6	2542 aa		11.96	□□□□□ -0.49
DDX39A-209	ENST00000589318		A0A1B0GXF2	115 aa		11.96	□□□□□ -0.49
DDX39A-209	ENST00000589318	hDV102S1	A0JD36	115 aa		11.96	□□□□□ -0.49
DDX39A-209	ENST00000589318	ORM2	P19652	201 aa		11.96	□□□□□ -0.49
DDX39A-209	ENST00000589318	BLCAP	P62952	87 aa		11.96	□□□□□ -0.49
DDX39A-209	ENST00000589318	LINC00527	Q9UJ94	153 aa		11.96	□□□□□ -0.49
DDX39A-209	ENST00000589318	TRAV41	A0A0B4J266	112 aa		11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	IGHV1-24	A0A0C4DH33	117 aa		11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	FCGR2B	P31994	310 aa	Predicted RBP	11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	LINC00305	Q7Z4B0	112 aa		11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	OR1N2	Q8NGR9	330 aa		11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	OR2K2	Q8NGT1	345 aa		11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	CLEC5A	Q9NY25	188 aa		11.96	□□□□□ -0.5
DDX39A-209	ENST00000589318	SIVA1	O15304	175 aa		11.95	□□□□□ -0.5
DDX39A-209	ENST00000589318	GNG7	O60262	68 aa		11.95	□□□□□ -0.5
DDX39A-209	ENST00000589318	IGHV3-23	P01764	117 aa		11.95	□□□□□ -0.5
DDX39A-209	ENST00000589318	HBB	P68871	147 aa		11.95	□□□□□ -0.5
DDX39A-209	ENST00000589318	LINC01545	Q5VT33	79 aa		11.95	□□□□□ -0.5
DDX39A-209	ENST00000589318	PRSS47	A8MTI9	375 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	SMAD7	O15105	426 aa	Known RBP	11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	KRTAP1-1	Q07627	177 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	C15orf32	Q32M92	178 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	CT83	Q5H943	113 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318		Q6YL49	198 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	ZNF502	Q8TBZ5	544 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	ZNF414	Q96IQ9	312 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318		A0A087X0K7	114 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	TMEM189	A5PLL7	270 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	CTSG	P08311	255 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	LYZ	P61626	148 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	GDF5OS	Q5U4N7	250 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	ZNF491	Q8N8L2	437 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	OR9G4	Q8NGQ1	327 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	OR10AG1	Q8NH19	301 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	URB1-AS1	Q96HZ7	61 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	SIGMAR1	Q99720	223 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	NDFIP1	Q9BT67	221 aa		11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX39A-209	ENST00000589318	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.93	□□□□□ -0.5
DDX39A-209	ENST00000589318	GGTLC3	B5MD39	225 aa		11.93	□□□□□ -0.5
DDX39A-209	ENST00000589318	PYY	P10082	97 aa		11.93	□□□□□ -0.5
DDX39A-209	ENST00000589318	PPIF	P30405	207 aa	Known RBP	11.93	□□□□□ -0.5
DDX39A-209	ENST00000589318	C2orf91	Q6ZV80	131 aa		11.93	□□□□□ -0.5
DDX39A-209	ENST00000589318		J3QR89	54 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	HSD52	Q0P140	79 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	FA2H	Q7L5A8	372 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	CCDC140	Q96MF4	163 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	NPFFR1	Q9GZQ6	430 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	OR4X2	Q8NGF9	303 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	FXYD5	Q96DB9	178 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	RNF125	Q96EQ8	232 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	GFRA4	Q9GZZ7	299 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318	HIGD1A	Q9Y241	93 aa		11.92	□□□□□ -0.5
DDX39A-209	ENST00000589318		A0A0G2JLM5	398 aa		11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	HIGD1C	A8MV81	97 aa		11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	UBE2L3	P68036	154 aa	Known RBP	11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	PSMG4	Q5JS54	123 aa		11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	MTURN	Q8N3F0	131 aa		11.91	□□□□□ -0.5

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