RNA–Protein interactions for RNA: ENST00000587275.1

U2AF2-204, Transcript of U2 small nuclear RNA auxiliary factor 2, human

TSL 4

Gene U2AF2, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF2-204	ENST00000587275	MRPL53	Q96EL3	112 aa	Known RBP	13.81	□□□□□ -0.2
U2AF2-204	ENST00000587275	C2orf50	Q96LR7	162 aa		13.81	□□□□□ -0.2
U2AF2-204	ENST00000587275	C18orf15	Q96N68	181 aa		13.81	□□□□□ -0.2
U2AF2-204	ENST00000587275	PFDN5	Q99471	154 aa		13.81	□□□□□ -0.2
U2AF2-204	ENST00000587275		A0A1W2PPQ1	181 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	C5orf51	A6NDU8	294 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	SLC25A5	P05141	298 aa	Known RBP	13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	SULT1A1	P50225	295 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	LINC00315	P59091	139 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	BAX	Q07812	192 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	RAB32	Q13637	225 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	TMEM14C	Q9P0S9	112 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	TP53TG3	Q9ULZ0	132 aa		13.8	□□□□□ -0.2
U2AF2-204	ENST00000587275	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	IGKV2D-40	P01614	121 aa	Predicted RBP	13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	BTF3	P20290	206 aa	Known RBP	13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	FUS	P35637	526 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	S100A10	P60903	97 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	RAB31	Q13636	194 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	CNPY1	Q3B7I2	92 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	ZFAND2A	Q8N6M9	145 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	CHAC2	Q8WUX2	184 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	LINC00467	Q9BRT7	94 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	SLC25A2	Q9BXI2	301 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	HERC1	Q15751	4861 aa		13.79	□□□□□ -0.2
U2AF2-204	ENST00000587275	TRGV1	A0A0A0MS02	117 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	SPINK4	O60575	86 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	FGF7	P21781	194 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	ANXA2R	Q3ZCQ2	193 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	FAM167A-AS1	Q96KT0	104 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	VGLL1	Q99990	258 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	FUT9	Q9Y231	359 aa		13.78	□□□□□ -0.2
U2AF2-204	ENST00000587275	HIST1H1E	P10412	219 aa	Known RBP	13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	CRISP2	P16562	243 aa		13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	RNASE4	P34096	147 aa	Known RBP	13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	TCL1A	P56279	114 aa		13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	C9orf47	Q6ZRZ4	202 aa		13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	EIF4E3	Q8N5X7	224 aa	Known RBP	13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	BLNK	Q8WV28	456 aa		13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	NPCDR1	Q9BY65	106 aa		13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	SCRT2	Q9NQ03	307 aa		13.77	□□□□□ -0.21
U2AF2-204	ENST00000587275	FAT1	Q14517	4588 aa		13.76	□□□□□ -0.21
U2AF2-204	ENST00000587275	TRGV2	A0A075B6R0	118 aa		13.76	□□□□□ -0.21
U2AF2-204	ENST00000587275	S100A11	P31949	105 aa		13.76	□□□□□ -0.21
U2AF2-204	ENST00000587275	ZNF680	Q8NEM1	530 aa		13.76	□□□□□ -0.21
U2AF2-204	ENST00000587275	TNFRSF18	Q9Y5U5	241 aa		13.76	□□□□□ -0.21
U2AF2-204	ENST00000587275	VPS13B	Q7Z7G8	4022 aa		13.75	□□□□□ -0.21
U2AF2-204	ENST00000587275	PDE6H	Q13956	83 aa		13.75	□□□□□ -0.21
U2AF2-204	ENST00000587275	ICAM4	Q14773	271 aa		13.75	□□□□□ -0.21
U2AF2-204	ENST00000587275	MIR17HG	Q75NE6	70 aa		13.75	□□□□□ -0.21
U2AF2-204	ENST00000587275	LINC00477	Q96M19	166 aa		13.75	□□□□□ -0.21
U2AF2-204	ENST00000587275	MRPL16	Q9NX20	251 aa	Known RBP	13.75	□□□□□ -0.21
U2AF2-204	ENST00000587275	IGHV3-53	P01767	116 aa		13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275	FAM122C	Q6P4D5	195 aa		13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275		Q8TAT8	98 aa		13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275	THAP6	Q8TBB0	222 aa		13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275	GPN1	Q9HCN4	374 aa	Predicted RBP	13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275	PRELID1	Q9Y255	219 aa		13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275	TIMM9	Q9Y5J7	89 aa		13.74	□□□□□ -0.21
U2AF2-204	ENST00000587275	MPDU1	O75352	247 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	NXPH4	O95158	308 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	H2AFB2	P0C5Z0	115 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	PVALB	P20472	110 aa	Predicted RBP	13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	NHLH2	Q02577	135 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	STX12	Q86Y82	276 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	PHYHIPL	Q96FC7	376 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	ST6GAL2	Q96JF0	529 aa		13.73	□□□□□ -0.21
U2AF2-204	ENST00000587275	SIVA1	O15304	175 aa		13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	GPX1	P07203	203 aa		13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	HBG1	P69891	147 aa		13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	HBG2	P69892	147 aa		13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	IBA57	Q5T440	356 aa	Known RBP	13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	FXYD5	Q96DB9	178 aa		13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	ZNF492	Q9P255	531 aa		13.72	□□□□□ -0.21
U2AF2-204	ENST00000587275	FHL2	Q14192	279 aa		13.71	□□□□□ -0.21
U2AF2-204	ENST00000587275	IGHV1OR15-1	A0A075B7D0	117 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275		H0YIZ8	118 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	SIX6	O95475	246 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	OR10J4	P0C629	311 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	CRYBA4	P53673	196 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	ATP6V1F	Q16864	119 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	OR5C1	Q8NGR4	320 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	OR5AC2	Q9NZP5	309 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	ICOS	Q9Y6W8	199 aa		13.7	□□□□□ -0.22
U2AF2-204	ENST00000587275	RGS13	O14921	159 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	PAX4	O43316	350 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	NMB	P08949	121 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	NBEAP1	P0C6P0	100 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	DNAH10OS	P0CZ25	163 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	C8orf49	Q96NF6	230 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	AAMDC	Q9H7C9	122 aa		13.69	□□□□□ -0.22
U2AF2-204	ENST00000587275	TMEM78	Q5T7P6	136 aa		13.68	□□□□□ -0.22
U2AF2-204	ENST00000587275	LYPD5	Q6UWN5	251 aa		13.68	□□□□□ -0.22
U2AF2-204	ENST00000587275	OR51M1	Q9H341	326 aa		13.68	□□□□□ -0.22
U2AF2-204	ENST00000587275	MDFIC	Q9P1T7	246 aa		13.68	□□□□□ -0.22
U2AF2-204	ENST00000587275	MYCBP2	O75592	4640 aa		13.67	□□□□□ -0.22
U2AF2-204	ENST00000587275	SFTA3	P0C7M3	94 aa		13.67	□□□□□ -0.22
U2AF2-204	ENST00000587275	XG	P55808	180 aa		13.67	□□□□□ -0.22
U2AF2-204	ENST00000587275	MUC21	Q5SSG8	566 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms