RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 FXYD5Q96DB9 178 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 AQP10Q96PS8 301 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 PYGO2Q9BRQ0 406 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 LINC00467Q9BRT7 94 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 PAXXQ9BUH6 204 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 MED28Q9H204 178 aa7.01□□□□□ -1.29
SKA2-208ENST00000583927 TIMM8BQ9Y5J9 83 aaPredicted RBP7.01□□□□□ -1.29
SKA2-208ENST00000583927 RBAKDNA6NC62 111 aa7□□□□□ -1.29
SKA2-208ENST00000583927 PRM2P04554 102 aa7□□□□□ -1.29
SKA2-208ENST00000583927 GIPP09681 153 aaPredicted RBP7□□□□□ -1.29
SKA2-208ENST00000583927 M6PRP20645 277 aa7□□□□□ -1.29
SKA2-208ENST00000583927 ZNF266Q14584 549 aa7□□□□□ -1.29
SKA2-208ENST00000583927 KIR3DS1Q14943 382 aa7□□□□□ -1.29
SKA2-208ENST00000583927 KHDC3LQ587J8 217 aa7□□□□□ -1.29
SKA2-208ENST00000583927 FFAR4Q5NUL3 377 aa7□□□□□ -1.29
SKA2-208ENST00000583927 EXOC3-AS1Q8N2X6 119 aa7□□□□□ -1.29
SKA2-208ENST00000583927 LINC00612Q8N6U2 182 aa7□□□□□ -1.29
SKA2-208ENST00000583927 C15orf53Q8NAA6 179 aa7□□□□□ -1.29
SKA2-208ENST00000583927 BLNKQ8WV28 456 aa7□□□□□ -1.29
SKA2-208ENST00000583927 ZNF503Q96F45 646 aa7□□□□□ -1.29
SKA2-208ENST00000583927 AGPAT4-IT1Q9H0P7 198 aa7□□□□□ -1.29
SKA2-208ENST00000583927 WFDC1Q9HC57 220 aa7□□□□□ -1.29
SKA2-208ENST00000583927 BIRC6Q9NR09 4857 aa7□□□□□ -1.29
SKA2-208ENST00000583927 CBY3A6NI87 242 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 ZNF324O75467 553 aaPredicted RBP6.99□□□□□ -1.29
SKA2-208ENST00000583927 IFITM2Q01629 132 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 ICAM4Q14773 271 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 FCN2Q15485 313 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
SKA2-208ENST00000583927 RNF212Q495C1 297 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 PQLC2Q6ZP29 291 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 POM121L12Q8N7R1 296 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 OR2G3Q8NGZ4 309 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 PSMG3Q9BT73 122 aaPredicted RBP6.99□□□□□ -1.29
SKA2-208ENST00000583927 LENEPQ9Y5L5 61 aa6.99□□□□□ -1.29
SKA2-208ENST00000583927 C7orf71A4D174 169 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 OR7C2O60412 319 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 ATP5G1P05496 136 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 ATP5G3P48201 142 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 SERF2P84101 59 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 DAZ2Q13117 558 aaKnown RBP6.98□□□□□ -1.29
SKA2-208ENST00000583927 ANXA2RQ3ZCQ2 193 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 TMEM78Q5T7P6 136 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 CCDC28AQ8IWP9 274 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 ZNF680Q8NEM1 530 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 TMED6Q8WW62 240 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 PHYHIPLQ96FC7 376 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 SMIM3Q9BZL3 60 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 ZNF492Q9P255 531 aa6.98□□□□□ -1.29
SKA2-208ENST00000583927 PKHD1P08F94 4074 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 TRAV12-3A0A0B4J271 114 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 OR10J4P0C629 311 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 PRB4P10163 310 aaPredicted RBP6.97□□□□□ -1.29
SKA2-208ENST00000583927 HTN1P15515 57 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 CSN1S1P47710 185 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 FAM3BP58499 235 aaPredicted RBP6.97□□□□□ -1.29
SKA2-208ENST00000583927 UBE2L3P68036 154 aaKnown RBP6.97□□□□□ -1.29
SKA2-208ENST00000583927 ERCC8Q13216 396 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 SMUG1Q53HV7 270 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 FAM122CQ6P4D5 195 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 TMEM88Q6PEY1 159 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 ZFAND2AQ8N6M9 145 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 RXFP4Q8TDU9 374 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 C18orf15Q96N68 181 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 VGLL1Q99990 258 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 Q9H3A6 140 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 PKD1P98161 4303 aa6.97□□□□□ -1.29
SKA2-208ENST00000583927 IGKV2-40A0A087WW87 121 aaPredicted RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 A0A1W2PPV4 95 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 SNURFLB1AK76 121 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 DIRC3C9JPN6 131 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 IGKV2D-40P01614 121 aaPredicted RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 MBP02144 154 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 GPX1P07203 203 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 DEFB130BP0DP73 79 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 DEFB130AP0DP74 79 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 ZNF138P52744 262 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 RANP62826 216 aaKnown RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 CD300CQ08708 224 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 LGALS9BQ3B8N2 356 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 IBA57Q5T440 356 aaKnown RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 EIF4E3Q8N5X7 224 aaKnown RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 C11orf72Q8NBR9 251 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 INO80EQ8NBZ0 244 aaPredicted RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 SUN5Q8TC36 379 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
SKA2-208ENST00000583927 OTORQ9NRC9 128 aa6.96□□□□□ -1.3
SKA2-208ENST00000583927 RNF222A6NCQ9 220 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 H3BNG1 76 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 STAG3L2P0CL84 134 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 STAG3L3P0CL85 134 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 HTN3P15516 51 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 Q5BKY6 102 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 FAM74A1Q5RGS3 127 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 OR10G4Q8NGN3 311 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 OR10G9Q8NGN4 311 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 OR10G7Q8NGN6 311 aa6.95□□□□□ -1.3
SKA2-208ENST00000583927 TNFSF18Q9UNG2 199 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms