RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TRAV34A0A0B4J273 112 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 H3BMM0 161 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 IGLV2-11P01706 119 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 AKR1C3P42330 323 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 HIST1H1AQ02539 215 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 TMEM183BQ1AE95 376 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 ACTL10Q5JWF8 245 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 TMEM75Q8N9X5 138 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 SGK494Q96LW2 274 aa12.09□□□□□ -0.47
CDK5RAP3-228ENST00000583363 AGRNO00468 2067 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TRBV6-1A0A0K0K1D8 114 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 NPIPB6E9PJ23 425 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 HLA-DRB4P13762 266 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 DEFB125Q8N687 156 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 CITED4Q96RK1 184 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 WFDC10AQ9H1F0 79 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 PPP1R14DQ9NXH3 145 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 PSG8Q9UQ74 426 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 HLA-DRB4X5D2U9 266 aa12.08□□□□□ -0.48
CDK5RAP3-228ENST00000583363 FBLL1A6NHQ2 334 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 A8MTW9 85 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 CT45A10P0DMU9 189 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 RPL35P42766 123 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TAS2R60P59551 318 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 FLI1Q01543 452 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 MRAPQ8TCY5 172 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 FMC1Q96HJ9 113 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ZNF492Q9P255 531 aa12.07□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ZNF138P52744 262 aa12.06□□□□□ -0.48
CDK5RAP3-228ENST00000583363 CEBPGP53567 150 aa12.06□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TMEM78Q5T7P6 136 aa12.06□□□□□ -0.48
CDK5RAP3-228ENST00000583363 PRNTQ86SH4 94 aa12.06□□□□□ -0.48
CDK5RAP3-228ENST00000583363 PARLQ9H300 379 aa12.06□□□□□ -0.48
CDK5RAP3-228ENST00000583363 RYR3Q15413 4870 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TMEM218A2RU14 115 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 UBE2G1P62253 170 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 SOHLH1Q5JUK2 328 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 STHQ8IWL8 128 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
CDK5RAP3-228ENST00000583363 LTAP01374 205 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 IGKV3-20P01619 116 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ZNF674Q2M3X9 581 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 FAM74A3Q4VXF1 159 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 BAGE2Q86Y30 109 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 IGF2BP2-AS1Q96M15 143 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ASCL2Q99929 193 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ZFP30Q9Y2G7 519 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 ZNF727A8MUV8 499 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 Q86TA4 180 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 Q8TAT8 98 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 SMIM7Q9BQ49 75 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 AURKAIP1Q9NWT8 199 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-228ENST00000583363 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.49
CDK5RAP3-228ENST00000583363 C9JCJ5 164 aa12.02□□□□□ -0.49
CDK5RAP3-228ENST00000583363 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
CDK5RAP3-228ENST00000583363 TMEM183AQ8IXX5 376 aa12.02□□□□□ -0.49
CDK5RAP3-228ENST00000583363 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
CDK5RAP3-228ENST00000583363 IGLV2-8P01709 118 aa12.01□□□□□ -0.49
CDK5RAP3-228ENST00000583363 CRISP2P16562 243 aa12.01□□□□□ -0.49
CDK5RAP3-228ENST00000583363 GNG4P50150 75 aa12.01□□□□□ -0.49
CDK5RAP3-228ENST00000583363 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
CDK5RAP3-228ENST00000583363 OCC1Q8TAD7 63 aa12.01□□□□□ -0.49
CDK5RAP3-228ENST00000583363 A8MZ25 164 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 IGHV4-30-4P0DP06 118 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 RPL35AP18077 110 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 TSPOP30536 169 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 LEPP41159 167 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 TMEM241Q24JQ0 296 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 C8orf49Q96NF6 230 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 NDFIP1Q9BT67 221 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 TUBA4BQ9H853 241 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 LY96Q9Y6Y9 160 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 COL7A1Q02388 2944 aa12□□□□□ -0.49
CDK5RAP3-228ENST00000583363 DNAH9Q9NYC9 4486 aa11.99□□□□□ -0.49
CDK5RAP3-228ENST00000583363 PGPEP1LA6NFU8 196 aa11.99□□□□□ -0.49
CDK5RAP3-228ENST00000583363 F8W036 122 aa11.99□□□□□ -0.49
CDK5RAP3-228ENST00000583363 ADCYAP1P18509 176 aa11.99□□□□□ -0.49
CDK5RAP3-228ENST00000583363 CDKN1BP46527 198 aa11.99□□□□□ -0.49
CDK5RAP3-228ENST00000583363 FXYD7P58549 80 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms