RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 C1QBP02746 253 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 HIST1H1EP10412 219 aaKnown RBP8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 PSG3Q16557 428 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 LGALSLQ3ZCW2 172 aaPredicted RBP8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 AMTNQ6UX39 209 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 RNF141Q8WVD5 230 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 SAT2Q96F10 170 aaPredicted RBP8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 ZNF503Q96F45 646 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 IGF2BP2-AS1Q96M15 143 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 SLC50A1Q9BRV3 221 aa8.9□□□□□ -0.98
SMARCD2-207ENST00000578234 FAT2Q9NYQ8 4349 aa8.9□□□□□ -0.99
SMARCD2-207ENST00000578234 TRBV19A0A075B6N1 114 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 CDC34P49427 236 aaPredicted RBP8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 TAS2R45P59539 299 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 UBE2L3P68036 154 aaKnown RBP8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 SERF2P84101 59 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 GUK1Q16774 197 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 KHDC3LQ587J8 217 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 EXOC3-AS1Q8N2X6 119 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 FXYD5Q96DB9 178 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 DNAH2Q9P225 4427 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 NACAE9PAV3 2078 aa8.89□□□□□ -0.99
SMARCD2-207ENST00000578234 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 NDUFB4O95168 129 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 NUDT3O95989 172 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 MBP02144 154 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 NBEAP1P0C6P0 100 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 HIST1H1AQ02539 215 aaPredicted RBP8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 ZFP69Q49AA0 526 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 AKR1C8PQ5T2L2 129 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 C15orf53Q8NAA6 179 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 RPUSD4Q96CM3 377 aaKnown RBP8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 HYLS1Q96M11 299 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 ACTR3CQ9C0K3 210 aaPredicted RBP8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 RYR1P21817 5038 aa8.88□□□□□ -0.99
SMARCD2-207ENST00000578234 M0R3E3 92 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 DEFB130BP0DP73 79 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 DEFB130AP0DP74 79 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 CNN1P51911 297 aaKnown RBP8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 ICAM4Q14773 271 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 SSX7Q7RTT5 188 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 IQCF2Q8IXL9 164 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 PHYHIPLQ96FC7 376 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
SMARCD2-207ENST00000578234 DNAH17Q9UFH2 4485 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 LYRM9A8MSI8 78 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 ZNF705GA8MUZ8 300 aaPredicted RBP8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 C16orf90A8MZG2 172 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 F5H768 121 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 CRXO43186 299 aaPredicted RBP8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 PRM2P04554 102 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 HTN1P15515 57 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 TSPOP30536 169 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 NKX2-5P52952 324 aaPredicted RBP8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 RANP62826 216 aaKnown RBP8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 OR8A1Q8NGG7 326 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 AAMDCQ9H7C9 122 aa8.86□□□□□ -0.99
SMARCD2-207ENST00000578234 M0R2Z0 102 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 ZNF253O75346 499 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 INSP01308 110 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 STAG3L2P0CL84 134 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 STAG3L3P0CL85 134 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 TPT1P13693 172 aaKnown RBP8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 FGF8P55075 233 aaPredicted RBP8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 PDE6HQ13956 83 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 ZNF726P1Q15940 193 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 C9orf62Q8N4C0 152 aa8.85□□□□□ -0.99
SMARCD2-207ENST00000578234 CTXND1A0A1B0GTU2 59 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 GCHFRP30047 84 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 FHITP49789 147 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 EIF5AP63241 154 aaKnown RBP8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 BAP18Q8IXM2 172 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 OR10J6PQ8NGY7 276 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 TMED6Q8WW62 240 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 Q9H3A6 140 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 RPH3ALQ9UNE2 315 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 PKD1P98161 4303 aa8.84□□□□□ -0.99
SMARCD2-207ENST00000578234 IGKV2-40A0A087WW87 121 aaPredicted RBP8.83□□□□□ -1
SMARCD2-207ENST00000578234 A0A1B0GV50 99 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 CXorf1O96002 111 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 IGKV2D-40P01614 121 aaPredicted RBP8.83□□□□□ -1
SMARCD2-207ENST00000578234 SEC11BP0C7V7 166 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 ERCC8Q13216 396 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 FAM213BQ8TBF2 198 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 LINC01587Q99440 93 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 KRTAP4-5Q9BYR2 181 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 TMPRSS5Q9H3S3 457 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 PRELID1Q9Y255 219 aa8.83□□□□□ -1
SMARCD2-207ENST00000578234 TRAV12-2A0A075B6T6 113 aa8.82□□□□□ -1
SMARCD2-207ENST00000578234 PLAC8L1A1L4L8 177 aa8.82□□□□□ -1
SMARCD2-207ENST00000578234 MAP1LC3B2A6NCE7 125 aa8.82□□□□□ -1
SMARCD2-207ENST00000578234 PGPA6NDG6 321 aa8.82□□□□□ -1
SMARCD2-207ENST00000578234 CBY3A6NI87 242 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms