RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 IGHV3-66A0A0C4DH42 116 aa14.36□□□□□ -0.11
SPNS3-204ENST00000575194 A0A1B0GW15 77 aa14.36□□□□□ -0.11
SPNS3-204ENST00000575194 ZNF207O43670 478 aaKnown RBP14.36□□□□□ -0.11
SPNS3-204ENST00000575194 IGHG4P01861 327 aa14.36□□□□□ -0.11
SPNS3-204ENST00000575194 OR4X2Q8NGF9 303 aa14.36□□□□□ -0.11
SPNS3-204ENST00000575194 VPREB3Q9UKI3 123 aa14.36□□□□□ -0.11
SPNS3-204ENST00000575194 A0A1W2PS18 150 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 HAX1O00165 279 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 APOHP02749 345 aaPredicted RBP14.35□□□□□ -0.11
SPNS3-204ENST00000575194 BMI1P35226 326 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 GDF5OSQ5U4N7 250 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 BORCS7Q96B45 105 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 A8MWP6 167 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 LY6G6DO95868 133 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 RPS20P60866 119 aaKnown RBP14.35□□□□□ -0.11
SPNS3-204ENST00000575194 RIGQ13278 110 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 Q6ZS46 218 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 C8orf86Q6ZUL3 223 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 GLMPQ8WWB7 406 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 YAE1D1Q9NRH1 226 aa14.35□□□□□ -0.11
SPNS3-204ENST00000575194 A0A1B0GUT8 65 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 TMEM189A5PLL7 270 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 SH2D1AO60880 128 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 HLA-DMBP28068 263 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 CRIP1P50238 77 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 IGFL4Q6B9Z1 124 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 Q71RC1 249 aaPredicted RBP14.34□□□□□ -0.11
SPNS3-204ENST00000575194 KCNS1Q96KK3 526 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 VGLL1Q99990 258 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 SAMD10Q9BYL1 202 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 NPFFR1Q9GZQ6 430 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 KLK15Q9H2R5 256 aa14.34□□□□□ -0.11
SPNS3-204ENST00000575194 IGHV3OR16-13A0A075B7E8 117 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 IGHV3-49A0A0A0MS15 119 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 IGHV3-74A0A0B4J1X5 117 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 ZNF705FA8MVS1 300 aaPredicted RBP14.33□□□□□ -0.12
SPNS3-204ENST00000575194 NUPR1O60356 82 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 TRBV12-3P01733 135 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 IGHV3-11P01762 117 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 GZMBP10144 247 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 LINC00310P59036 64 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 SRSF2Q01130 221 aaKnown RBP14.33□□□□□ -0.12
SPNS3-204ENST00000575194 KLF5Q13887 457 aaPredicted RBP14.33□□□□□ -0.12
SPNS3-204ENST00000575194 Q6YL49 198 aa14.33□□□□□ -0.12
SPNS3-204ENST00000575194 TEX29Q8N6K0 151 aa14.32□□□□□ -0.12
SPNS3-204ENST00000575194 ASCL2Q99929 193 aa14.32□□□□□ -0.12
SPNS3-204ENST00000575194 TMEM160Q9NX00 188 aa14.32□□□□□ -0.12
SPNS3-204ENST00000575194 IQCJQ1A5X6 159 aa14.32□□□□□ -0.12
SPNS3-204ENST00000575194 SSBP4Q9BWG4 385 aaPredicted RBP14.32□□□□□ -0.12
SPNS3-204ENST00000575194 PSMB8P28062 276 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 UNQ9165/PRO28630Q6UXU0 137 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 RNF182Q8N6D2 247 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 SIGLECL1Q8N7X8 197 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 Q8TAT8 98 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 C18orf32Q8TCD1 76 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 C16orf92Q96LL3 132 aa14.31□□□□□ -0.12
SPNS3-204ENST00000575194 ALKBH7Q9BT30 221 aaPredicted RBP14.31□□□□□ -0.12
SPNS3-204ENST00000575194 PEF1Q9UBV8 284 aaKnown RBP14.31□□□□□ -0.12
SPNS3-204ENST00000575194 TRAV8-2A0A0B4J237 113 aa14.3□□□□□ -0.12
SPNS3-204ENST00000575194 F2Z2F3 143 aa14.3□□□□□ -0.12
SPNS3-204ENST00000575194 PRB4P10163 310 aaPredicted RBP14.3□□□□□ -0.12
SPNS3-204ENST00000575194 TMEM78Q5T7P6 136 aa14.3□□□□□ -0.12
SPNS3-204ENST00000575194 GATD1Q8NB37 220 aa14.3□□□□□ -0.12
SPNS3-204ENST00000575194 CDPF1Q6NVV7 123 aa14.29□□□□□ -0.12
SPNS3-204ENST00000575194 IL17RELQ6ZVW7 336 aa14.29□□□□□ -0.12
SPNS3-204ENST00000575194 TMEM95Q3KNT9 176 aa14.29□□□□□ -0.12
SPNS3-204ENST00000575194 FAM106AQ4KMX7 169 aa14.29□□□□□ -0.12
SPNS3-204ENST00000575194 PRDM13Q9H4Q3 707 aa14.29□□□□□ -0.12
SPNS3-204ENST00000575194 DAZ1Q9NQZ3 744 aaKnown RBP14.29□□□□□ -0.12
SPNS3-204ENST00000575194 IGHV7-4-1A0A0J9YVY3 117 aa14.28□□□□□ -0.12
SPNS3-204ENST00000575194 PRAC2D3DTV9 90 aa14.28□□□□□ -0.12
SPNS3-204ENST00000575194 K7EMT4 169 aa14.28□□□□□ -0.12
SPNS3-204ENST00000575194 ZNF138P52744 262 aa14.28□□□□□ -0.12
SPNS3-204ENST00000575194 NIPBLQ6KC79 2804 aaeCLIP14.27□□□□□ -0.12
SPNS3-204ENST00000575194 TEP1Q99973 2627 aaKnown RBP14.27□□□□□ -0.12
SPNS3-204ENST00000575194 LOC102724200A0A096LPH7 203 aaPredicted RBP14.27□□□□□ -0.12
SPNS3-204ENST00000575194 FABP5P3A8MUU1 101 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 ARMS2P0C7Q2 107 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 ERCC8Q13216 396 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 C9orf47Q6ZRZ4 202 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 LCNL1Q6ZST4 164 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 RCHY1Q96PM5 261 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 PPP1R14DQ9NXH3 145 aa14.27□□□□□ -0.12
SPNS3-204ENST00000575194 TSTD3H0UI37 97 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 ZNF324O75467 553 aaPredicted RBP14.27□□□□□ -0.13
SPNS3-204ENST00000575194 SCGB1D1O95968 90 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 GPX1P07203 203 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 AMTP48728 403 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 PKIAP61925 76 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 FOXE3Q13461 319 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 SAMD13Q5VXD3 122 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 UFC1Q9Y3C8 167 aa14.27□□□□□ -0.13
SPNS3-204ENST00000575194 HIST1H1AQ02539 215 aaPredicted RBP14.26□□□□□ -0.13
SPNS3-204ENST00000575194 GPHB5Q86YW7 130 aa14.26□□□□□ -0.13
SPNS3-204ENST00000575194 TPPP3Q9BW30 176 aa14.26□□□□□ -0.13
SPNS3-204ENST00000575194 NAGKQ9UJ70 344 aa14.26□□□□□ -0.13
SPNS3-204ENST00000575194 NF1P21359 2839 aa14.26□□□□□ -0.13
SPNS3-204ENST00000575194 CUBNO60494 3623 aa14.26□□□□□ -0.13
SPNS3-204ENST00000575194 OVOL1O14753 267 aa14.25□□□□□ -0.13
SPNS3-204ENST00000575194 HOXA3O43365 443 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms