RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 H3BTX0 84 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 SLC17A3O00476 420 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 MRPS12O15235 138 aaKnown RBP4.65□□□□□ -1.67
CYLD-216ENST00000569891 CACNG7P62955 275 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 BCL6BQ8N143 479 aaPredicted RBP4.65□□□□□ -1.67
CYLD-216ENST00000569891 KLHDC1Q8N7A1 406 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 RNF152Q8N8N0 203 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 KCNS1Q96KK3 526 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 MLST8Q9BVC4 326 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 SAMD10Q9BYL1 202 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 IGHV3-35A0A0C4DH35 117 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 PGPEP1LA6NFU8 196 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 HIGD1CA8MV81 97 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 K7EN84 100 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 C4orf3Q8WVX3 66 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 PRR25Q96S07 402 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 AKAP6Q13023 2319 aa4.65□□□□□ -1.67
CYLD-216ENST00000569891 A8MWP6 167 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 ORM1P02763 201 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 COX8CQ7Z4L0 72 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 WFDC11Q8NEX6 87 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 ZNF702PQ9H963 129 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 OR4C46A6NHA9 309 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 TCL1AP56279 114 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 MRPL54Q6P161 138 aaKnown RBP4.64□□□□□ -1.67
CYLD-216ENST00000569891 C9orf47Q6ZRZ4 202 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 NHLRC2Q8NBF2 726 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 NEU1Q99519 415 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 FAM208BQ5VWN6 2430 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 TRAV25A0A0B4J276 109 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 LINC01548A6NM66 108 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 RNASE1P07998 156 aaKnown RBP4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
CYLD-216ENST00000569891 DNLZQ5SXM8 178 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 PPP1R17O96001 155 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 IGLV2-8P01709 118 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 PPBPP02775 128 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 S100A4P26447 101 aaKnown RBP4.64□□□□□ -1.67
CYLD-216ENST00000569891 COA6Q5JTJ3 125 aaKnown RBP4.64□□□□□ -1.67
CYLD-216ENST00000569891 ODF3Q96PU9 254 aa4.64□□□□□ -1.67
CYLD-216ENST00000569891 C19orf71A6NCJ1 209 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 ZNF207O43670 478 aaKnown RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 AMBPP02760 352 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 FER1L6-AS1Q8NA97 138 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 TSSC4Q9Y5U2 329 aaPredicted RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.63□□□□□ -1.67
CYLD-216ENST00000569891 EPG5Q9HCE0 2579 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 PRRC2AP48634 2157 aaKnown RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 NAV3Q8IVL0 2385 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 C20orf202A1L168 122 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 NPIPB6E9PJ23 425 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 GPX1P07203 203 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 NUP35Q8NFH5 326 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 OR1N2Q8NGR9 330 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 PACRGQ96M98 296 aaPredicted RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 SPTAN1Q13813 2472 aaKnown RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 DNAJC9-AS1A6NH13 148 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 M0R3E3 92 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 NDUFA7O95182 113 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 FOXA3P55318 350 aaPredicted RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 Q0VG73 95 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 RNF114Q9Y508 228 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 IGKV2-40A0A087WW87 121 aaPredicted RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 HSBP1O75506 76 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 IGKV2D-40P01614 121 aaPredicted RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 SNRPCP09234 159 aaKnown RBP4.63□□□□□ -1.67
CYLD-216ENST00000569891 G0S2P27469 103 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 LINC00479Q96M42 142 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 C16orf95Q9H693 158 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 LAMTOR2Q9Y2Q5 125 aa4.63□□□□□ -1.67
CYLD-216ENST00000569891 SH2D1AO60880 128 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 CAMPP49913 170 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 TPPP3Q9BW30 176 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 PLXNB1O43157 2135 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 TCF21O43680 179 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 RPLP1P05386 114 aaKnown RBP4.62□□□□□ -1.67
CYLD-216ENST00000569891 MED14OSP0DP75 135 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 CBLN1P23435 193 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 IQCJQ1A5X6 159 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 IL17RELQ6ZVW7 336 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 SYT8Q8NBV8 401 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 KLHL30-AS1Q8NEE0 82 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 MYOZ3Q8TDC0 251 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 DUX5Q96PT3 197 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 IGHV3-66A0A0C4DH42 116 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 CLPSL1A2RUU4 121 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 HOXD3P31249 432 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms