RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 C9JCJ5 164 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 PEX7O00628 323 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 APOC3P02656 99 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 ADCYAP1P18509 176 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 AKR1C3P42330 323 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 CNN1P51911 297 aaKnown RBP9.93□□□□□ -0.82
CLK3-218ENST00000566926 CEBPGP53567 150 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 Q6ZWC4 215 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 SMIM12Q96EX1 92 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 PARLQ9H300 379 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 NAT8Q9UHE5 227 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 LY96Q9Y6Y9 160 aa9.93□□□□□ -0.82
CLK3-218ENST00000566926 K7EQG2 157 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 ISLRO14498 428 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 TCRAP04437 139 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 TAS2R60P59551 318 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 DEFB131AP59861 70 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 C2CD4CQ8TF44 421 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 FMC1Q96HJ9 113 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 EDA2RQ9HAV5 297 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
CLK3-218ENST00000566926 B4DEV8 164 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 SLC17A3O00476 420 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
CLK3-218ENST00000566926 ID1P41134 155 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
CLK3-218ENST00000566926 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 C16orf92Q96LL3 132 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 RETNQ9HD89 108 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 KLF12Q9Y4X4 402 aa9.91□□□□□ -0.82
CLK3-218ENST00000566926 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 H3BTX0 84 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 UBE2G1P62253 170 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 SNRPD3P62318 126 aaKnown RBP9.9□□□□□ -0.82
CLK3-218ENST00000566926 RHEBQ15382 184 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 TMEM183BQ1AE95 376 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 ZNF674Q2M3X9 581 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 STHQ8IWL8 128 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 EXOC3-AS1Q8N2X6 119 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 DCANP1Q8TF63 244 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 C17orf77Q96MU5 243 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 CSTL1Q9H114 145 aa9.9□□□□□ -0.82
CLK3-218ENST00000566926 RBAKDNA6NC62 111 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 DIRC3C9JPN6 131 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 SPRY2O43597 315 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 SNRPCP09234 159 aaKnown RBP9.89□□□□□ -0.83
CLK3-218ENST00000566926 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 GNG4P50150 75 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 OVOL2Q9BRP0 275 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
CLK3-218ENST00000566926 SOCS3O14543 225 aa9.88□□□□□ -0.83
CLK3-218ENST00000566926 ZNF124Q15973 351 aa9.88□□□□□ -0.83
CLK3-218ENST00000566926 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
CLK3-218ENST00000566926 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
CLK3-218ENST00000566926 RNF183Q96D59 192 aa9.88□□□□□ -0.83
CLK3-218ENST00000566926 SDF2L1Q9HCN8 221 aa9.88□□□□□ -0.83
CLK3-218ENST00000566926 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 M0R036 132 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 PSG3Q16557 428 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 CENPWQ5EE01 88 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 FAM24BQ8N5W8 94 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 DERL1Q9BUN8 251 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 ZFP30Q9Y2G7 519 aa9.87□□□□□ -0.83
CLK3-218ENST00000566926 M0R3E3 92 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 GNG5P63218 68 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 PSMG4Q5JS54 123 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 SAPCD1Q5SSQ6 148 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 CASC10Q5T4H9 136 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 MORN3Q6PF18 240 aaPredicted RBP9.86□□□□□ -0.83
CLK3-218ENST00000566926 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 LINC01551Q86U37 167 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 IGF2BP2-AS1Q96M15 143 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 RPH3ALQ9UNE2 315 aa9.86□□□□□ -0.83
CLK3-218ENST00000566926 DNAH7Q8WXX0 4024 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 A0A087WWC5 75 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 LTAP01374 205 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
CLK3-218ENST00000566926 FLI1Q01543 452 aaPredicted RBP9.85□□□□□ -0.83
CLK3-218ENST00000566926 ADIRFQ15847 76 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 BAGE2Q86Y30 109 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 ZNF738Q8NE65 137 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 NDFIP1Q9BT67 221 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 PPP1R14DQ9NXH3 145 aa9.85□□□□□ -0.83
CLK3-218ENST00000566926 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 PPP1R2P9O14990 202 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
CLK3-218ENST00000566926 MT-ND4LP03901 98 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
CLK3-218ENST00000566926 ACTL10Q5JWF8 245 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 Q86TA4 180 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 TRPT1Q86TN4 253 aaKnown RBP9.84□□□□□ -0.83
CLK3-218ENST00000566926 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
CLK3-218ENST00000566926 CTDSP1Q9GZU7 261 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms