RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 STAG3L2P0CL84 134 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 STAG3L3P0CL85 134 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 ZNF345Q14585 488 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 C12orf74Q32Q52 190 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 AKR1C8PQ5T2L2 129 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 RXFP4Q8TDU9 374 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 VGLL1Q99990 258 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 NIPSNAP3BQ9BS92 247 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 DKK2Q9UBU2 259 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 RPH3ALQ9UNE2 315 aa12.97□□□□□ -0.33
TRADD-205ENST00000566247 TRAV12-3A0A0B4J271 114 aa12.96□□□□□ -0.33
TRADD-205ENST00000566247 PGPA6NDG6 321 aa12.96□□□□□ -0.33
TRADD-205ENST00000566247 HMSDA8MTL9 139 aa12.96□□□□□ -0.33
TRADD-205ENST00000566247 SLC25A5P05141 298 aaKnown RBP12.96□□□□□ -0.33
TRADD-205ENST00000566247 IQCF2Q8IXL9 164 aa12.96□□□□□ -0.33
TRADD-205ENST00000566247 OR11H4Q8NGC9 324 aa12.96□□□□□ -0.33
TRADD-205ENST00000566247 A0A0D9SG52 128 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 CXorf1O96002 111 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 AZU1P20160 251 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 GCHFRP30047 84 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 CCDC28AQ8IWP9 274 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 C16orf74Q96GX8 76 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 CYTL1Q9NRR1 136 aa12.95□□□□□ -0.34
TRADD-205ENST00000566247 DEFB131BA0A096LNP1 70 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 C7orf71A4D174 169 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 RBAKDNA6NC62 111 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 IGLL5B9A064 214 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 GPX1P07203 203 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 RNASE4P34096 147 aaKnown RBP12.94□□□□□ -0.34
TRADD-205ENST00000566247 ZNF138P52744 262 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 Q8TAT8 98 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 TMEM167BQ9NRX6 74 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
TRADD-205ENST00000566247 CTXND1A0A1B0GTU2 59 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 DIRC3C9JPN6 131 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 DAD1P61803 113 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 BTN1A1Q13410 526 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 Q6ZNX1 250 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 ZNF493Q6ZR52 646 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 ZNF471Q9BX82 626 aaPredicted RBP12.93□□□□□ -0.34
TRADD-205ENST00000566247 TENM2Q9NT68 2774 aa12.93□□□□□ -0.34
TRADD-205ENST00000566247 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 KLLNB2CW77 178 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 BCL2L11O43521 198 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 PFDN1O60925 122 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 NMBP08949 121 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 CRISP2P16562 243 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 GOLT1AQ6ZVE7 132 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 SSX7Q7RTT5 188 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 TMEM263Q8WUH6 116 aaKnown RBP12.92□□□□□ -0.34
TRADD-205ENST00000566247 PYGO2Q9BRQ0 406 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 PLA2G2EQ9NZK7 142 aa12.92□□□□□ -0.34
TRADD-205ENST00000566247 LY6G6CO95867 125 aa12.91□□□□□ -0.34
TRADD-205ENST00000566247 HTN3P15516 51 aa12.91□□□□□ -0.34
TRADD-205ENST00000566247 TCTAP57738 103 aa12.91□□□□□ -0.34
TRADD-205ENST00000566247 CD300CQ08708 224 aa12.91□□□□□ -0.34
TRADD-205ENST00000566247 LINC00476Q8WZB0 136 aa12.91□□□□□ -0.34
TRADD-205ENST00000566247 ST6GAL2Q96JF0 529 aa12.91□□□□□ -0.34
TRADD-205ENST00000566247 TIMM8BQ9Y5J9 83 aaPredicted RBP12.91□□□□□ -0.34
TRADD-205ENST00000566247 hCG_2014768A0A024R1R8 64 aa12.9□□□□□ -0.34
TRADD-205ENST00000566247 TRBV7-9A0A0J9YWB2 115 aa12.9□□□□□ -0.34
TRADD-205ENST00000566247 GNG5P63218 68 aa12.9□□□□□ -0.34
TRADD-205ENST00000566247 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
TRADD-205ENST00000566247 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
TRADD-205ENST00000566247 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
TRADD-205ENST00000566247 RNASE8Q8TDE3 154 aaKnown RBP12.9□□□□□ -0.34
TRADD-205ENST00000566247 DYNC2H1Q8NCM8 4307 aaKnown RBP12.89□□□□□ -0.35
TRADD-205ENST00000566247 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 PLAC8L1A1L4L8 177 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 TMUB2Q71RG4 321 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 TCTE3Q8IZS6 198 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 SUN5Q8TC36 379 aa12.89□□□□□ -0.35
TRADD-205ENST00000566247 CBY3A6NI87 242 aa12.88□□□□□ -0.35
TRADD-205ENST00000566247 RGS13O14921 159 aa12.88□□□□□ -0.35
TRADD-205ENST00000566247 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
TRADD-205ENST00000566247 PRR9Q5T870 116 aa12.88□□□□□ -0.35
TRADD-205ENST00000566247 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
TRADD-205ENST00000566247 NOP10Q9NPE3 64 aaKnown RBP12.88□□□□□ -0.35
TRADD-205ENST00000566247 LENEPQ9Y5L5 61 aa12.88□□□□□ -0.35
TRADD-205ENST00000566247 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
TRADD-205ENST00000566247 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
TRADD-205ENST00000566247 K7EQM0 130 aa12.87□□□□□ -0.35
TRADD-205ENST00000566247 ZNF324O75467 553 aaPredicted RBP12.87□□□□□ -0.35
TRADD-205ENST00000566247 SEC11BP0C7V7 166 aa12.87□□□□□ -0.35
TRADD-205ENST00000566247 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
TRADD-205ENST00000566247 EIF4E3Q8N5X7 224 aaKnown RBP12.87□□□□□ -0.35
TRADD-205ENST00000566247 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
TRADD-205ENST00000566247 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
TRADD-205ENST00000566247 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
TRADD-205ENST00000566247 TPT1P13693 172 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms