RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 OR8D4Q8NGM9 314 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 OR5AK2Q8NH90 309 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 ZNF431Q8TF32 576 aaPredicted RBP1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BHQ93079 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 DPH3Q96FX2 82 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 MCEEQ96PE7 176 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 AQP10Q96PS8 301 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 SDF2Q99470 211 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BNQ99877 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST1H2BMQ99879 126 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 SEC11CQ9BY50 192 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 REG4Q9BYZ8 158 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 TTTY12Q9BZ98 90 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 UQCR10Q9UDW1 63 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 CCDC88BA6NC98 1476 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 FANCAO15360 1455 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 KIF21AQ7Z4S6 1674 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 PCNX2A6NKB5 2137 aa1.48□□□□□ -2.17
SHCBP1-202ENST00000563219 KDM5CP41229 1560 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 NRKQ7Z2Y5 1582 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 DOCK3Q8IZD9 2030 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 DSPPQ9NZW4 1301 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SLIT2O94813 1529 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TRAV7A0A075B6U4 112 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A087WXM4 84 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 A0A0D9SG52 128 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TRBV7-6A0A0J9YX20 115 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 C3orf85A0A1B0GTC6 90 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 FAM24AA6NFZ4 105 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 F8W1H4 67 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 H3BRN7 92 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 M0R233 179 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 UQCRQO14949 82 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SNCGO76070 127 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 CYB5AP00167 134 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 IGHV3-7P01780 117 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TCRAP04437 139 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 IGLC1P0CG04 106 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SLC25A4P12235 298 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 FABP4P15090 132 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SNCAP37840 140 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 INSL3P51460 131 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SUPT4H1P63272 117 aaKnown RBP1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 CCL20P78556 96 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 HMGN3Q15651 99 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TMEM155Q4W5P6 130 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 Q5BKY6 102 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 LINC01545Q5VT33 79 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 OR2T2Q6IF00 324 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 LCA10Q71F78 164 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 ARPINQ7Z6K5 226 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 KRTAP13-1Q8IUC0 172 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 HIST3H2BBQ8N257 126 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 LINC00471Q8N535 108 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 C10orf82Q8WW14 230 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 H1FXQ92522 213 aaKnown RBP1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TXNDC17Q9BRA2 123 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TIMM21Q9BVV7 248 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SLC39A9Q9NUM3 307 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TMEM106BQ9NUM4 274 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 PSORS1C2Q9UIG4 136 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 TPRKBQ9Y3C4 175 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 CHCHD2Q9Y6H1 151 aaPredicted RBP1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 A2ML1A8K2U0 1454 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 CUL7Q14999 1698 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 ADAMTS7Q9UKP4 1686 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 NUP210Q8TEM1 1887 aaPredicted RBP1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 CDK5RAP2Q96SN8 1893 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 ADAMTS12P58397 1594 aa1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 INO80Q9ULG1 1556 aaPredicted RBP1.47□□□□□ -2.17
SHCBP1-202ENST00000563219 SBF1O95248 1867 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ADGBQ8N7X0 1667 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 PXDNLA1KZ92 1463 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 FYCO1Q9BQS8 1478 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 CEP164Q9UPV0 1460 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ECM29Q5VYK3 1845 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 TRAV12-2A0A075B6T6 113 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 IGHV1-18A0A0C4DH31 117 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF860A6NHJ4 632 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF727A8MUV8 499 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF705FA8MVS1 300 aaPredicted RBP1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 LY6LH3BQJ8 138 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 M0R378 163 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 GYPAP02724 150 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 RBP4P02753 201 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 TRGC1P0CF51 173 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF705BP0CI00 300 aaPredicted RBP1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 TPT1P13693 172 aaKnown RBP1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 HLA-DRB4P13762 266 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 YPEL3P61236 119 aaPredicted RBP1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 UBE2BP63146 152 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 HBBP68871 147 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 QRFPP83859 136 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 DIAPH2-AS1Q14236 149 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ADIRFQ15847 76 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 KHDC3LQ587J8 217 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 FAM27BQ5VT28 67 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 Q6AWC8 147 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 LYZL1Q6UWQ5 148 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 Q6ZUT4 128 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms