RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 HTR1AP08908 422 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 SPCS3P61009 180 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 PSME3P61289 254 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 KRR1Q13601 381 aaKnown RBP1.23□□□□□ -2.21
DENND4A-204ENST00000562028 LIN52Q52LA3 116 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 TEX36Q5VZQ5 186 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 AKAP14Q86UN6 197 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 TMEM86BQ8N661 226 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 CLDN22Q8N7P3 220 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 OR13C4Q8NGS5 318 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 PFN4Q8NHR9 129 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 FAM172AQ8WUF8 416 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 AQP3Q92482 292 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 BORCS7Q96B45 105 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 DCUN1D1Q96GG9 259 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 PHB2Q99623 299 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 TENM3Q9P273 2699 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 MCM3APO60318 1980 aa1.23□□□□□ -2.21
DENND4A-204ENST00000562028 WNK1Q9H4A3 2382 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 COL7A1Q02388 2944 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 C19orf84I3L1E1 186 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 PSMD12O00232 456 aaPredicted RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 PGRMC1O00264 195 aaKnown RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 GEMIN2O14893 280 aaKnown RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 CCL16O15467 120 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 HAND1O96004 215 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 FABP1P07148 127 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 CST2P09228 141 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 RANP62826 216 aaKnown RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 RPL19P84098 196 aaKnown RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 SMIM15Q7Z3B0 74 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 TSTD1Q8NFU3 115 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 OR4D11Q8NGI4 311 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 OR4C6Q8NH72 309 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 PYDC1Q8WXC3 89 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 NIPSNAP1Q9BPW8 284 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 CMSS1Q9BQ75 279 aaKnown RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 KIFC1Q9BW19 673 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 LRTM1Q9HBL6 345 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 SPANXA1Q9NS26 97 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 CMTM6Q9NX76 183 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 MYH7BA7E2Y1 1941 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 ZNF106Q9H2Y7 1883 aaKnown RBP1.22□□□□□ -2.21
DENND4A-204ENST00000562028 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
DENND4A-204ENST00000562028 EXPH5Q8NEV8 1989 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 A0A1B0GV72 72 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 SMIM9A6NGZ8 99 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 TMEM238C9JI98 176 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 PIN1P1O15428 100 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 PFDN1O60925 122 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 OR7C1O76099 320 aaPredicted RBP1.21□□□□□ -2.22
DENND4A-204ENST00000562028 HIST1H1TP22492 207 aaPredicted RBP1.21□□□□□ -2.22
DENND4A-204ENST00000562028 CD52P31358 61 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 GNG10P50151 68 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 HBA1P69905 142 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 TFAMQ00059 246 aaKnown RBP1.21□□□□□ -2.22
DENND4A-204ENST00000562028 ACOT6Q3I5F7 207 aaPredicted RBP1.21□□□□□ -2.22
DENND4A-204ENST00000562028 FKBP1CQ5VVH2 108 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 HACD4Q5VWC8 232 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 TRIQKQ629K1 86 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 DHRS4L2Q6PKH6 230 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 C20orf196Q8IYI0 205 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 OR6V1Q8N148 313 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 LINC00471Q8N535 108 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 TEX47Q8TBZ9 253 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 ZHX1-C8orf76Q96EF9 292 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 BOLA2Q9H3K6 86 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 C22orf24Q9Y442 160 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 GOLGA4Q13439 2230 aaKnown RBP1.21□□□□□ -2.22
DENND4A-204ENST00000562028 SPAG17Q6Q759 2223 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 MYLKQ15746 1914 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 MYH13Q9UKX3 1938 aa1.21□□□□□ -2.22
DENND4A-204ENST00000562028 TNRC6BQ9UPQ9 1833 aaKnown RBP1.2□□□□□ -2.22
DENND4A-204ENST00000562028 H0YJX3 145 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 CHP2O43745 196 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 TNFSF15O95150 251 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 HLA-DRB1P01911 266 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 TTRP02766 147 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 TCTAP57738 103 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 ARPC4P59998 168 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 RAB4BP61018 213 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 TSNQ15631 228 aaKnown RBP1.2□□□□□ -2.22
DENND4A-204ENST00000562028 ALX1Q15699 326 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 IAH1Q2TAA2 248 aaPredicted RBP1.2□□□□□ -2.22
DENND4A-204ENST00000562028 DEFB109BQ30KR1 87 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 LYG2Q86SG7 212 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 TAC4Q86UU9 113 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 OOSP2Q86WS3 158 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 OR10X1Q8NGY0 326 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 NEK7Q8TDX7 302 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 DGCR14Q96DF8 476 aaKnown RBP1.2□□□□□ -2.22
DENND4A-204ENST00000562028 SIGMAR1Q99720 223 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 TMEM70Q9BUB7 260 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 DDA1Q9BW61 102 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 ULBP3Q9BZM4 244 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 DCSTAMPQ9H295 470 aa1.2□□□□□ -2.22
DENND4A-204ENST00000562028 MRPL40Q9NQ50 206 aaKnown RBP1.2□□□□□ -2.22
DENND4A-204ENST00000562028 BIN3Q9NQY0 253 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms