RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 FMC1Q96HJ9 113 aa8.81□□□□□ -1
LDLR-212ENST00000560467 NDFIP1Q9BT67 221 aa8.81□□□□□ -1
LDLR-212ENST00000560467 BIN3Q9NQY0 253 aa8.81□□□□□ -1
LDLR-212ENST00000560467 SLC17A3O00476 420 aa8.8□□□□□ -1
LDLR-212ENST00000560467 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
LDLR-212ENST00000560467 TAS2R60P59551 318 aa8.8□□□□□ -1
LDLR-212ENST00000560467 TMEM241Q24JQ0 296 aa8.8□□□□□ -1
LDLR-212ENST00000560467 TMEM78Q5T7P6 136 aa8.8□□□□□ -1
LDLR-212ENST00000560467 GOLT1AQ6ZVE7 132 aa8.8□□□□□ -1
LDLR-212ENST00000560467 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
LDLR-212ENST00000560467 C11orf52Q96A22 123 aa8.8□□□□□ -1
LDLR-212ENST00000560467 SEC11CQ9BY50 192 aa8.8□□□□□ -1
LDLR-212ENST00000560467 SCO2A0A1W2PP80 73 aa8.79□□□□□ -1
LDLR-212ENST00000560467 DIRC3C9JPN6 131 aa8.79□□□□□ -1
LDLR-212ENST00000560467 K7EQG2 157 aa8.79□□□□□ -1
LDLR-212ENST00000560467 IGLV1-51P01701 117 aa8.79□□□□□ -1
LDLR-212ENST00000560467 EDN2P20800 178 aa8.79□□□□□ -1
LDLR-212ENST00000560467 RPL35P42766 123 aaKnown RBP8.79□□□□□ -1
LDLR-212ENST00000560467 PSMG4Q5JS54 123 aa8.79□□□□□ -1
LDLR-212ENST00000560467 SAPCD1Q5SSQ6 148 aa8.79□□□□□ -1
LDLR-212ENST00000560467 Q8N1Y9 231 aa8.79□□□□□ -1
LDLR-212ENST00000560467 SVBPQ8N300 66 aa8.79□□□□□ -1
LDLR-212ENST00000560467 SELENOKQ9Y6D0 94 aa8.79□□□□□ -1
LDLR-212ENST00000560467 RBAKDNA6NC62 111 aa8.78□□□□□ -1
LDLR-212ENST00000560467 DUSP14O95147 198 aaKnown RBP8.78□□□□□ -1
LDLR-212ENST00000560467 APOC3P02656 99 aa8.78□□□□□ -1
LDLR-212ENST00000560467 ZNF688P0C7X2 276 aa8.78□□□□□ -1
LDLR-212ENST00000560467 GNG5P63218 68 aa8.78□□□□□ -1
LDLR-212ENST00000560467 PNRC1Q12796 327 aaPredicted RBP8.78□□□□□ -1
LDLR-212ENST00000560467 TMEM183BQ1AE95 376 aa8.78□□□□□ -1
LDLR-212ENST00000560467 IGFL4Q6B9Z1 124 aa8.78□□□□□ -1
LDLR-212ENST00000560467 BAGE2Q86Y30 109 aa8.78□□□□□ -1
LDLR-212ENST00000560467 RNF182Q8N6D2 247 aa8.78□□□□□ -1
LDLR-212ENST00000560467 DCANP1Q8TF63 244 aa8.78□□□□□ -1
LDLR-212ENST00000560467 PARLQ9H300 379 aa8.78□□□□□ -1
LDLR-212ENST00000560467 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
LDLR-212ENST00000560467 NAT8Q9UHE5 227 aa8.78□□□□□ -1
LDLR-212ENST00000560467 ZFP30Q9Y2G7 519 aa8.78□□□□□ -1
LDLR-212ENST00000560467 HYDINQ4G0P3 5121 aa8.78□□□□□ -1
LDLR-212ENST00000560467 PLECQ15149 4684 aaKnown RBP8.77□□□□□ -1.01
LDLR-212ENST00000560467 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 C9JQL5 133 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 M0R036 132 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 M0R3E3 92 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 FLI1Q01543 452 aaPredicted RBP8.77□□□□□ -1.01
LDLR-212ENST00000560467 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 GTSCR1Q86UQ5 136 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 TMEM75Q8N9X5 138 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 DAZAP1Q96EP5 407 aaKnown RBP8.77□□□□□ -1.01
LDLR-212ENST00000560467 TVP23CQ96ET8 276 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 LINC00477Q96M19 166 aa8.77□□□□□ -1.01
LDLR-212ENST00000560467 ZNF705FA8MVS1 300 aaPredicted RBP8.76□□□□□ -1.01
LDLR-212ENST00000560467 OR11H12B2RN74 326 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 C9JCJ5 164 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 SOCS3O14543 225 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 SNAPINO95295 136 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 MGST1P10620 155 aaKnown RBP8.76□□□□□ -1.01
LDLR-212ENST00000560467 C2CD4CQ8TF44 421 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 SMIM12Q96EX1 92 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 PSG8Q9UQ74 426 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 KLF12Q9Y4X4 402 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 LY96Q9Y6Y9 160 aa8.76□□□□□ -1.01
LDLR-212ENST00000560467 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 TRBV6-1A0A0K0K1D8 114 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 B4DEV8 164 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 HLA-DMBP28068 263 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 TSPOP30536 169 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 ZNF138P52744 262 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 DEFB131AP59861 70 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 HIST1H1AQ02539 215 aaPredicted RBP8.75□□□□□ -1.01
LDLR-212ENST00000560467 ADIRFQ15847 76 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 CENPWQ5EE01 88 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 FOXI2Q6ZQN5 318 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 OR8A1Q8NGG7 326 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 RETNQ9HD89 108 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 CARHSP1Q9Y2V2 147 aaKnown RBP8.75□□□□□ -1.01
LDLR-212ENST00000560467 ALMS1Q8TCU4 4167 aa8.75□□□□□ -1.01
LDLR-212ENST00000560467 IGKV2-40A0A087WW87 121 aaPredicted RBP8.74□□□□□ -1.01
LDLR-212ENST00000560467 A8MZ25 164 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 IGKV2D-40P01614 121 aaPredicted RBP8.74□□□□□ -1.01
LDLR-212ENST00000560467 MT-ND4LP03901 98 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 NUTF2P61970 127 aaKnown RBP8.74□□□□□ -1.01
LDLR-212ENST00000560467 C9orf47Q6ZRZ4 202 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 C15orf54Q8N8G6 183 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 FAM110AQ9BQ89 295 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 DERL1Q9BUN8 251 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 LENEPQ9Y5L5 61 aa8.74□□□□□ -1.01
LDLR-212ENST00000560467 PPP1R2P9O14990 202 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 LEPP41159 167 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 C10orf91Q5T1B1 145 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 STHQ8IWL8 128 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 OR4B1Q8NGF8 309 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 C20orf173Q96LM9 149 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 SGK494Q96LW2 274 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
LDLR-212ENST00000560467 TRBV7-9A0A0J9YWB2 115 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms