RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 STAG3L2P0CL84 134 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 STAG3L3P0CL85 134 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 CT45A10P0DMU9 189 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 HTN3P15516 51 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 GCHFRP30047 84 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 RNASE4P34096 147 aaKnown RBP6.48□□□□□ -1.37
SPG11-207ENST00000558138 GFI1BQ5VTD9 330 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 CEMP1Q6PRD7 247 aaPredicted RBP6.48□□□□□ -1.37
SPG11-207ENST00000558138 ZNF503Q96F45 646 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 TMEM167BQ9NRX6 74 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 CELA1Q9UNI1 258 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 YTHDF2Q9Y5A9 579 aaKnown RBP6.48□□□□□ -1.37
SPG11-207ENST00000558138 TRAV10A0A0B4J240 114 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 CTXND1A0A1B0GTU2 59 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 C7orf71A4D174 169 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 C11orf94C9JXX5 98 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 H7BYZ3 331 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 K7EQM0 130 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 RGS13O14921 159 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 TPT1P13693 172 aaKnown RBP6.47□□□□□ -1.37
SPG11-207ENST00000558138 FGF8P55075 233 aaPredicted RBP6.47□□□□□ -1.37
SPG11-207ENST00000558138 TAS2R60P59551 318 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 DAD1P61803 113 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 FAM222AQ5U5X8 452 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 Q6ZNX1 250 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 Q6ZTC4 211 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 GOLT1AQ6ZVE7 132 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 TMUB2Q71RG4 321 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 OR11H4Q8NGC9 324 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 Q8TAT8 98 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 STOML3Q8TAV4 291 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 C2CD4CQ8TF44 421 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 C16orf74Q96GX8 76 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 ODF3Q96PU9 254 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 VGLL1Q99990 258 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 C20orf144Q9BQM9 153 aa6.47□□□□□ -1.37
SPG11-207ENST00000558138 DEFB131BA0A096LNP1 70 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 A0A1B0GV50 99 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 CBY3A6NI87 242 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 SNURFLB1AK76 121 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 IGLL5B9A064 214 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 DIRC3C9JPN6 131 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 IFNA7P01567 189 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 PRM2P04554 102 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 ZNF138P52744 262 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 UBE2G2P60604 165 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 GNG5P63218 68 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 BTN1A1Q13410 526 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 KIR3DS1Q14943 382 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 C9orf47Q6ZRZ4 202 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 TCTE3Q8IZS6 198 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 FAM213BQ8TBF2 198 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 NDFIP1Q9BT67 221 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 AGPAT4-IT1Q9H0P7 198 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 CYTL1Q9NRR1 136 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 DNAH7Q8WXX0 4024 aa6.46□□□□□ -1.38
SPG11-207ENST00000558138 RBAKDNA6NC62 111 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 LY6G6CO95867 125 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 DEFB130BP0DP73 79 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 DEFB130AP0DP74 79 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 EIF5AL1Q6IS14 154 aaKnown RBP6.45□□□□□ -1.38
SPG11-207ENST00000558138 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 ST6GAL2Q96JF0 529 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 ZNF492Q9P255 531 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 DKK2Q9UBU2 259 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 NAGKQ9UJ70 344 aa6.45□□□□□ -1.38
SPG11-207ENST00000558138 SERTM2A0A1B0GWG4 89 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 LYRM9A8MSI8 78 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 UMAD1C9J7I0 102 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 SEC11BP0C7V7 166 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 AZU1P20160 251 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 SUMO1P63165 101 aaKnown RBP6.44□□□□□ -1.38
SPG11-207ENST00000558138 CD300CQ08708 224 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 C12orf74Q32Q52 190 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 ZFP69Q49AA0 526 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 CST9LP1Q5W188 147 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 ZNF493Q6ZR52 646 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 C5orf17Q8NAS9 161 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 TMEM263Q8WUH6 116 aaKnown RBP6.44□□□□□ -1.38
SPG11-207ENST00000558138 SGK494Q96LW2 274 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 PYGO2Q9BRQ0 406 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 TMPRSS5Q9H3S3 457 aa6.44□□□□□ -1.38
SPG11-207ENST00000558138 NOP10Q9NPE3 64 aaKnown RBP6.44□□□□□ -1.38
SPG11-207ENST00000558138 TIMM8BQ9Y5J9 83 aaPredicted RBP6.44□□□□□ -1.38
SPG11-207ENST00000558138 TRAV8-1A0A0A6YYK1 113 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 LCE6AA0A183 80 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 KLLNB2CW77 178 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 F6UZH7 168 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 C1QBP02746 253 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 PPT1P50897 306 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 ZNF726P1Q15940 193 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 PRNTQ86SH4 94 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 EIF4E3Q8N5X7 224 aaKnown RBP6.43□□□□□ -1.38
SPG11-207ENST00000558138 ZNF680Q8NEM1 530 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 SFT2D1Q8WV19 159 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 TMED6Q8WW62 240 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 TREM1Q9NP99 234 aa6.43□□□□□ -1.38
SPG11-207ENST00000558138 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms