RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ARV1Q9H2C2 271 aa7.01□□□□□ -1.29
HNRNPC-228ENST00000557033 NUDT15Q9NV35 164 aa7.01□□□□□ -1.29
HNRNPC-228ENST00000557033 CELA1Q9UNI1 258 aa7.01□□□□□ -1.29
HNRNPC-228ENST00000557033 VPS13DQ5THJ4 4388 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 IGHV4-4A0A075B6R2 117 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM240BA0A1B0GVZ2 78 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM25EA8MYX2 175 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 AGPAT2O15120 278 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 NUDT3O95989 172 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 HBE1P02100 147 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 PVALBP20472 110 aaPredicted RBP7□□□□□ -1.29
HNRNPC-228ENST00000557033 B2MP61769 119 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 SLC38A11Q08AI6 406 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 ARL16Q0P5N6 197 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 AMTNQ6UX39 209 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 GSG1LQ6UXU4 331 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 PATE2Q6UY27 113 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 C1orf158Q8N1D5 194 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 NRACQ8N912 160 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 IGF2BP2-AS1Q96M15 143 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 UHRF2Q96PU4 802 aa7□□□□□ -1.29
HNRNPC-228ENST00000557033 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 CXCL2P19875 107 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 CXCL3P19876 107 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 BCAP31P51572 246 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 SRSF9Q13242 221 aaKnown RBP eCLIP6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 IL15RAQ13261 267 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 OXA1LQ15070 435 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 PSG3Q16557 428 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 Q6ZRG5 221 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 LINC00305Q7Z4B0 112 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 ZNF738Q8NE65 137 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 LRRC20Q8TCA0 184 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM210BQ96KR6 192 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 SEC22CQ9BRL7 303 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 NIPSNAP3BQ9BS92 247 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 C11orf1Q9H5F2 150 aa6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 LSM5Q9Y4Y9 91 aaKnown RBP6.99□□□□□ -1.29
HNRNPC-228ENST00000557033 H3BTX0 84 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 S100A11P31949 105 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 CAV2P51636 162 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 EMP1P54849 157 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 ASAH1Q13510 395 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 LINC01620Q4KN68 170 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 ZNF767PQ75MW2 155 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 BPIFA4PQ86YQ2 179 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 RNF182Q8N6D2 247 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 OR11H7Q8NGC8 314 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 OR8A1Q8NGG7 326 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 MGST2Q99735 147 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 TMEM208Q9BTX3 173 aa6.98□□□□□ -1.29
HNRNPC-228ENST00000557033 A0A087WZ39 114 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM24AA6NFZ4 105 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 CRXO43186 299 aaPredicted RBP6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 COX7A2P2O60397 106 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 CST7O76096 145 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 INSP01308 110 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 P0DMU3 169 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM231AP0DMU4 169 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM231CP0DMU5 169 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 SULT1A1P50225 295 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 RHOBP62745 196 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 HBG1P69891 147 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 HBG2P69892 147 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 TWIST1Q15672 202 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 ATP6V1FQ16864 119 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 FAM222AQ5U5X8 452 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 C10orf113Q5VZT2 155 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 LCN15Q6UWW0 184 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 TMEM252Q8N6L7 170 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 SLC50A1Q9BRV3 221 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 LYRM2Q9NU23 88 aaPredicted RBP6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 UQCC1Q9NVA1 299 aa6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 YTHDF2Q9Y5A9 579 aaKnown RBP6.97□□□□□ -1.29
HNRNPC-228ENST00000557033 TSPOP30536 169 aa6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 RPL29P47914 159 aaKnown RBP6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 GUK1Q16774 197 aa6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 STX12Q86Y82 276 aa6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 TMEM256Q8N2U0 113 aa6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 OR1L4Q8NGR5 311 aa6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 RPUSD4Q96CM3 377 aaKnown RBP6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 PFDN5Q99471 154 aa6.96□□□□□ -1.3
HNRNPC-228ENST00000557033 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 DNAH6Q9C0G6 4158 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 LYRM9A8MSI8 78 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 M0R2Z0 102 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 MPDU1O75352 247 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 UPK1BO75841 260 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 RLN2P04090 185 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 IGLC2P0DOY2 106 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 CDKN1BP46527 198 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 FHITP49789 147 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 S100A10P60903 97 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 HIST1H1AQ02539 215 aaPredicted RBP6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms