RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 IL15RAQ13261 267 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 BTN1A1Q13410 526 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 RAB32Q13637 225 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 CNPY1Q3B7I2 92 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 C12orf45Q8N5I9 185 aaPredicted RBP9.16□□□□□ -0.94
TGFB3-204ENST00000556285 TMEM252Q8N6L7 170 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 OR1L4Q8NGR5 311 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 ZNF503Q96F45 646 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 PYGO2Q9BRQ0 406 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 AGPAT4-IT1Q9H0P7 198 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 Q9H3A6 140 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 NUDT15Q9NV35 164 aa9.16□□□□□ -0.94
TGFB3-204ENST00000556285 A0A096LPF7 62 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 C7orf71A4D174 169 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 ZNF324O75467 553 aaPredicted RBP9.15□□□□□ -0.94
TGFB3-204ENST00000556285 SULT1A1P50225 295 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 PRR9Q5T870 116 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 FAM19A4Q96LR4 140 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 PFDN5Q99471 154 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 LYRM2Q9NU23 88 aaPredicted RBP9.15□□□□□ -0.94
TGFB3-204ENST00000556285 MRPS16Q9Y3D3 137 aaKnown RBP9.15□□□□□ -0.94
TGFB3-204ENST00000556285 KLF12Q9Y4X4 402 aa9.15□□□□□ -0.94
TGFB3-204ENST00000556285 KLLNB2CW77 178 aa9.14□□□□□ -0.95
TGFB3-204ENST00000556285 H3BNG1 76 aa9.14□□□□□ -0.95
TGFB3-204ENST00000556285 ZNF253O75346 499 aa9.14□□□□□ -0.95
TGFB3-204ENST00000556285 SLC25A5P05141 298 aaKnown RBP9.14□□□□□ -0.95
TGFB3-204ENST00000556285 HIST1H1EP10412 219 aaKnown RBP9.14□□□□□ -0.95
TGFB3-204ENST00000556285 FGF7P21781 194 aa9.14□□□□□ -0.95
TGFB3-204ENST00000556285 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
TGFB3-204ENST00000556285 BLNKQ8WV28 456 aa9.14□□□□□ -0.95
TGFB3-204ENST00000556285 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
TGFB3-204ENST00000556285 TP53TG3Q9ULZ0 132 aa9.14□□□□□ -0.95
TGFB3-204ENST00000556285 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
TGFB3-204ENST00000556285 TRGV1A0A0A0MS02 117 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 IGKV2D-40P01614 121 aaPredicted RBP9.13□□□□□ -0.95
TGFB3-204ENST00000556285 H2AFB2P0C5Z0 115 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 S100A11P31949 105 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
TGFB3-204ENST00000556285 TTC32Q5I0X7 151 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 Q8N1X5 172 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 VGLL1Q99990 258 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 TMEM14CQ9P0S9 112 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 FUT9Q9Y231 359 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 TIMM9Q9Y5J7 89 aa9.13□□□□□ -0.95
TGFB3-204ENST00000556285 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 PVALBP20472 110 aaPredicted RBP9.12□□□□□ -0.95
TGFB3-204ENST00000556285 NHLH2Q02577 135 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 ICAM4Q14773 271 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 FAM122CQ6P4D5 195 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 ZFAND2AQ8N6M9 145 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 THAP6Q8TBB0 222 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 FAM167A-AS1Q96KT0 104 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 LINC00477Q96M19 166 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 LINC00467Q9BRT7 94 aa9.12□□□□□ -0.95
TGFB3-204ENST00000556285 GPN1Q9HCN4 374 aaPredicted RBP9.12□□□□□ -0.95
TGFB3-204ENST00000556285 A0A1W2PPQ1 181 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 SPINK4O60575 86 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 SIX6O95475 246 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 CRISP2P16562 243 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 TCL1AP56279 114 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 LINC00315P59091 139 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 HBG1P69891 147 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 HBG2P69892 147 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 MIR17HGQ75NE6 70 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 STX12Q86Y82 276 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 EIF4E3Q8N5X7 224 aaKnown RBP9.11□□□□□ -0.95
TGFB3-204ENST00000556285 ZNF680Q8NEM1 530 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 C18orf15Q96N68 181 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 NPCDR1Q9BY65 106 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 SCRT2Q9NQ03 307 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 MRPL16Q9NX20 251 aaKnown RBP9.11□□□□□ -0.95
TGFB3-204ENST00000556285 PRELID1Q9Y255 219 aa9.11□□□□□ -0.95
TGFB3-204ENST00000556285 MPDU1O75352 247 aa9.1□□□□□ -0.95
TGFB3-204ENST00000556285 GPX1P07203 203 aa9.1□□□□□ -0.95
TGFB3-204ENST00000556285 ATP6V1FQ16864 119 aa9.1□□□□□ -0.95
TGFB3-204ENST00000556285 Q6ZRN7 208 aaPredicted RBP9.1□□□□□ -0.95
TGFB3-204ENST00000556285 Q8TAT8 98 aa9.1□□□□□ -0.95
TGFB3-204ENST00000556285 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
TGFB3-204ENST00000556285 OR10J4P0C629 311 aa9.09□□□□□ -0.95
TGFB3-204ENST00000556285 BTF3P20290 206 aaKnown RBP9.09□□□□□ -0.95
TGFB3-204ENST00000556285 PDE6HQ13956 83 aa9.09□□□□□ -0.95
TGFB3-204ENST00000556285 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
TGFB3-204ENST00000556285 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 FAM240BA0A1B0GVZ2 78 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 RGS13O14921 159 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 SIVA1O15304 175 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 PAX4O43316 350 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 NXPH4O95158 308 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 NBEAP1P0C6P0 100 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 OR5C1Q8NGR4 320 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
TGFB3-204ENST00000556285 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms