RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 MORN3Q6PF18 240 aaPredicted RBP15.05■□□□□ -0
FOXN3-209ENST00000555353 FOXI2Q6ZQN5 318 aa15.05■□□□□ -0
FOXN3-209ENST00000555353 COMMD7Q86VX2 200 aa15.05■□□□□ -0
FOXN3-209ENST00000555353 CCDC28AQ8IWP9 274 aa15.05■□□□□ -0
FOXN3-209ENST00000555353 RPUSD4Q96CM3 377 aaKnown RBP15.05■□□□□ -0
FOXN3-209ENST00000555353 RPH3ALQ9UNE2 315 aa15.05■□□□□ -0
FOXN3-209ENST00000555353 H3BMM0 161 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 NDUFS6O75380 124 aaKnown RBP15.04■□□□□ -0
FOXN3-209ENST00000555353 HLA-DRB4P13762 266 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 EBLN2Q6P2I7 272 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 RNF183Q96D59 192 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 C20orf173Q96LM9 149 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 ATG101Q9BSB4 218 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 SAV1Q9H4B6 383 aaPredicted RBP15.04■□□□□ -0
FOXN3-209ENST00000555353 HLA-DRB4X5D2U9 266 aa15.04■□□□□ -0
FOXN3-209ENST00000555353 TCRAP04437 139 aa15.03■□□□□ -0
FOXN3-209ENST00000555353 DEFB1P60022 68 aa15.03■□□□□ -0
FOXN3-209ENST00000555353 NUTF2P61970 127 aaKnown RBP15.03■□□□□ -0
FOXN3-209ENST00000555353 ZNF705FA8MVS1 300 aaPredicted RBP15.02■□□□□ -0
FOXN3-209ENST00000555353 DIRC3C9JPN6 131 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 PEX7O00628 323 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 NDUFA5Q16718 116 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 GDF5OSQ5U4N7 250 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 UQCC3Q6UW78 93 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 CYB561D1Q8N8Q1 229 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 TREM1Q9NP99 234 aa15.02■□□□□ -0
FOXN3-209ENST00000555353 TMEM250H0YL14 139 aa15.02□□□□□ -0.01
FOXN3-209ENST00000555353 GNG5P63218 68 aa15.02□□□□□ -0.01
FOXN3-209ENST00000555353 OR10J6PQ8NGY7 276 aa15.02□□□□□ -0.01
FOXN3-209ENST00000555353 F6UB75 175 aa15.01□□□□□ -0.01
FOXN3-209ENST00000555353 AKR1C3P42330 323 aa15.01□□□□□ -0.01
FOXN3-209ENST00000555353 GOLT1AQ6ZVE7 132 aa15.01□□□□□ -0.01
FOXN3-209ENST00000555353 OR4B1Q8NGF8 309 aa15.01□□□□□ -0.01
FOXN3-209ENST00000555353 C11orf52Q96A22 123 aa15.01□□□□□ -0.01
FOXN3-209ENST00000555353 SCO2A0A1W2PP80 73 aa15□□□□□ -0.01
FOXN3-209ENST00000555353 RBAKDNA6NC62 111 aa15□□□□□ -0.01
FOXN3-209ENST00000555353 IGKV3-20P01619 116 aa15□□□□□ -0.01
FOXN3-209ENST00000555353 CNN1P51911 297 aaKnown RBP15□□□□□ -0.01
FOXN3-209ENST00000555353 EDA2RQ9HAV5 297 aa15□□□□□ -0.01
FOXN3-209ENST00000555353 A0A0J9YX75 114 aa14.99□□□□□ -0.01
FOXN3-209ENST00000555353 FBLL1A6NHQ2 334 aaKnown RBP14.99□□□□□ -0.01
FOXN3-209ENST00000555353 S100A9P06702 114 aaKnown RBP14.99□□□□□ -0.01
FOXN3-209ENST00000555353 EIF4E3Q8N5X7 224 aaKnown RBP14.99□□□□□ -0.01
FOXN3-209ENST00000555353 OR8A1Q8NGG7 326 aa14.99□□□□□ -0.01
FOXN3-209ENST00000555353 DUSP14O95147 198 aaKnown RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 SRP19P09132 144 aaKnown RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 GIG44P09565 113 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 UBE2G1P62253 170 aa14.98□□□□□ -0.01
FOXN3-209ENST00000555353 SRSF3P84103 164 aaKnown RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 C1QTNF4Q9BXJ3 329 aa14.98□□□□□ -0.01
FOXN3-209ENST00000555353 SLC35B3Q9H1N7 401 aa14.98□□□□□ -0.01
FOXN3-209ENST00000555353 IGKV2-40A0A087WW87 121 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 PRAC2D3DTV9 90 aa14.98□□□□□ -0.01
FOXN3-209ENST00000555353 IGKV2D-40P01614 121 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 CEBPGP53567 150 aa14.98□□□□□ -0.01
FOXN3-209ENST00000555353 HIST1H1AQ02539 215 aaPredicted RBP14.98□□□□□ -0.01
FOXN3-209ENST00000555353 CLUHP3Q96NS8 147 aa14.98□□□□□ -0.01
FOXN3-209ENST00000555353 TMEM78Q5T7P6 136 aa14.97□□□□□ -0.01
FOXN3-209ENST00000555353 TMEM75Q8N9X5 138 aa14.97□□□□□ -0.01
FOXN3-209ENST00000555353 OR11H2Q8NH07 326 aa14.97□□□□□ -0.01
FOXN3-209ENST00000555353 C2CD4CQ8TF44 421 aa14.97□□□□□ -0.01
FOXN3-209ENST00000555353 FMC1Q96HJ9 113 aa14.97□□□□□ -0.01
FOXN3-209ENST00000555353 C9orf47Q6ZRZ4 202 aa14.96□□□□□ -0.01
FOXN3-209ENST00000555353 LINC00477Q96M19 166 aa14.96□□□□□ -0.01
FOXN3-209ENST00000555353 XCL2Q9UBD3 114 aa14.96□□□□□ -0.01
FOXN3-209ENST00000555353 TMEM183BQ1AE95 376 aa14.95□□□□□ -0.02
FOXN3-209ENST00000555353 MUC7Q8TAX7 377 aa14.95□□□□□ -0.02
FOXN3-209ENST00000555353 PPP1R14DQ9NXH3 145 aa14.95□□□□□ -0.02
FOXN3-209ENST00000555353 NPIPB6E9PJ23 425 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 ZNF705DP0CH99 300 aaPredicted RBP14.94□□□□□ -0.02
FOXN3-209ENST00000555353 ZNF705BP0CI00 300 aaPredicted RBP14.94□□□□□ -0.02
FOXN3-209ENST00000555353 PRB4P10163 310 aaPredicted RBP14.94□□□□□ -0.02
FOXN3-209ENST00000555353 FXYD7P58549 80 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 TAS2R60P59551 318 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 FLI1Q01543 452 aaPredicted RBP14.94□□□□□ -0.02
FOXN3-209ENST00000555353 KLF12Q9Y4X4 402 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 C9JQL5 133 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 RPL35P42766 123 aaKnown RBP14.94□□□□□ -0.02
FOXN3-209ENST00000555353 ERCC8Q13216 396 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 ZNF674Q2M3X9 581 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 VGLL1Q99990 258 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 NDFIP1Q9BT67 221 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 PARLQ9H300 379 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 PSG8Q9UQ74 426 aa14.94□□□□□ -0.02
FOXN3-209ENST00000555353 TRAV8-1A0A0A6YYK1 113 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 TRAV34A0A0B4J273 112 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 A0A0J9YWU9 116 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 ZNF138P52744 262 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 SOHLH1Q5JUK2 328 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 LINC00479Q96M42 142 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 AGPAT4-IT1Q9H0P7 198 aa14.93□□□□□ -0.02
FOXN3-209ENST00000555353 TRBV6-1A0A0K0K1D8 114 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 SFTA3P0C7M3 94 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 FAM74A3Q4VXF1 159 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 PRNTQ86SH4 94 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 CSNK1G2-AS1Q8NCQ2 148 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 SGK494Q96LW2 274 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 SMIM7Q9BQ49 75 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 ZNF492Q9P255 531 aa14.92□□□□□ -0.02
FOXN3-209ENST00000555353 LENEPQ9Y5L5 61 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms