RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 EVI2AP22794 236 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 CRYBA4P53673 196 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 CD300CQ08708 224 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 ERCC8Q13216 396 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 C12orf45Q8N5I9 185 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-211ENST00000553801 PFDN5Q99471 154 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 VGLL1Q99990 258 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 GSKIPQ9P0R6 139 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 V9GYH0 126 aa12.03□□□□□ -0.48
SYNE2-211ENST00000553801 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 RGS13O14921 159 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 PRAF2O60831 178 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 GPX1P07203 203 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 BTN1A1Q13410 526 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 Q6ZSN1 163 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 C8orf49Q96NF6 230 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 RCL1Q9Y2P8 373 aaKnown RBP12.02□□□□□ -0.49
SYNE2-211ENST00000553801 MYCBP2O75592 4640 aa12.02□□□□□ -0.49
SYNE2-211ENST00000553801 TRBV19A0A075B6N1 114 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 C7orf66A4D0T2 115 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 H3BMQ9 156 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 M0R3E3 92 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 NDUFB6O95139 128 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 NMBP08949 121 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 S100A5P33763 92 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 FHL2Q14192 279 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 NRARPQ7Z6K4 114 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 AGPAT4-IT1Q9H0P7 198 aa12.01□□□□□ -0.49
SYNE2-211ENST00000553801 MRPL16Q9NX20 251 aaKnown RBP12.01□□□□□ -0.49
SYNE2-211ENST00000553801 NAP1L6A6NFF2 107 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 J3QL48 77 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 L7N2F9 121 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 CRISP2P16562 243 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 SRIP30626 198 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 VAMP2P63027 116 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 MRPL32Q9BYC8 188 aaKnown RBP12□□□□□ -0.49
SYNE2-211ENST00000553801 TIMM9Q9Y5J7 89 aa12□□□□□ -0.49
SYNE2-211ENST00000553801 SRRM2Q9UQ35 2752 aaKnown RBP11.99□□□□□ -0.49
SYNE2-211ENST00000553801 IGHV1OR15-1A0A075B7D0 117 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 TRGV4A0A0C4DH28 118 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 HIST1H1EP10412 219 aaKnown RBP11.99□□□□□ -0.49
SYNE2-211ENST00000553801 INPP1P49441 399 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 PDE6HQ13956 83 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 C9orf47Q6ZRZ4 202 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 PCNPQ8WW12 178 aaKnown RBP11.99□□□□□ -0.49
SYNE2-211ENST00000553801 TMEM70Q9BUB7 260 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 C20orf85Q9H1P6 137 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 TMEM14CQ9P0S9 112 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 FLVCR2Q9UPI3 526 aa11.99□□□□□ -0.49
SYNE2-211ENST00000553801 E5RGE8 158 aa11.98□□□□□ -0.49
SYNE2-211ENST00000553801 MBPP02686 304 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-211ENST00000553801 BCAP31P51572 246 aa11.98□□□□□ -0.49
SYNE2-211ENST00000553801 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
SYNE2-211ENST00000553801 AAMDCQ9H7C9 122 aa11.98□□□□□ -0.49
SYNE2-211ENST00000553801 TP53TG3Q9ULZ0 132 aa11.98□□□□□ -0.49
SYNE2-211ENST00000553801 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 K7EQD1 137 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 ORM1P02763 201 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 RPL29P47914 159 aaKnown RBP11.97□□□□□ -0.49
SYNE2-211ENST00000553801 ZNF415Q09FC8 603 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 IQCF2Q8IXL9 164 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 NTN5Q8WTR8 489 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-211ENST00000553801 SRRQ9GZT4 340 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 SLC39A9Q9NUM3 307 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 UQCC1Q9NVA1 299 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 WDR83OSQ9Y284 106 aa11.97□□□□□ -0.49
SYNE2-211ENST00000553801 PSCAO43653 123 aa11.96□□□□□ -0.49
SYNE2-211ENST00000553801 NDUFB4O95168 129 aa11.96□□□□□ -0.49
SYNE2-211ENST00000553801 CRYGDP07320 174 aa11.96□□□□□ -0.49
SYNE2-211ENST00000553801 ZNF846Q147U1 533 aa11.96□□□□□ -0.49
SYNE2-211ENST00000553801 ZFAND2AQ8N6M9 145 aa11.96□□□□□ -0.49
SYNE2-211ENST00000553801 TXNDC17Q9BRA2 123 aa11.96□□□□□ -0.49
SYNE2-211ENST00000553801 GYPEP15421 78 aa11.95□□□□□ -0.5
SYNE2-211ENST00000553801 CAV2P51636 162 aa11.95□□□□□ -0.5
SYNE2-211ENST00000553801 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
SYNE2-211ENST00000553801 BLNKQ8WV28 456 aa11.95□□□□□ -0.5
SYNE2-211ENST00000553801 MITD1Q8WV92 249 aa11.95□□□□□ -0.5
SYNE2-211ENST00000553801 CST7O76096 145 aa11.94□□□□□ -0.5
SYNE2-211ENST00000553801 HAMPP81172 84 aa11.94□□□□□ -0.5
SYNE2-211ENST00000553801 BAXQ07812 192 aa11.94□□□□□ -0.5
SYNE2-211ENST00000553801 SPANXN2Q5MJ10 180 aa11.94□□□□□ -0.5
SYNE2-211ENST00000553801 TRIQKQ629K1 86 aa11.94□□□□□ -0.5
SYNE2-211ENST00000553801 ZNF492Q9P255 531 aa11.94□□□□□ -0.5
SYNE2-211ENST00000553801 LSM5Q9Y4Y9 91 aaKnown RBP11.94□□□□□ -0.5
SYNE2-211ENST00000553801 IGKV2-40A0A087WW87 121 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-211ENST00000553801 TRBV7-9A0A0J9YWB2 115 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 CENPXA8MT69 81 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 IGKV2D-40P01614 121 aaPredicted RBP11.93□□□□□ -0.5
SYNE2-211ENST00000553801 PYYP10082 97 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 VWC2Q2TAL6 325 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 CNPY1Q3B7I2 92 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 PRR9Q5T870 116 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 CHAC2Q8WUX2 184 aa11.93□□□□□ -0.5
SYNE2-211ENST00000553801 GPN1Q9HCN4 374 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms