RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SRP19P09132 144 aaKnown RBP1.58□□□□□ -2.16
SCFD1-210ENST00000553693 IFI6P09912 130 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 FGF6P10767 208 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 CRYBB3P26998 211 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 S100A5P33763 92 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 HINT1P49773 126 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-210ENST00000553693 ARF6P62330 175 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 CTAG1AP78358 180 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 IFITM2Q01629 132 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 ARHGAP11BQ3KRB8 267 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 TMEM155Q4W5P6 130 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 GRINAQ7Z429 371 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 PDZD9Q8IXQ8 264 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 OR4S1Q8NGB4 309 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 OR5D16Q8NGK9 328 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 OR10D4PQ8NGN7 298 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF563Q8TA94 476 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 C11orf40Q8WZ69 217 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 ERMAPQ96PL5 475 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-210ENST00000553693 SDF2Q99470 211 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 SIGMAR1Q99720 223 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 C11orf1Q9H5F2 150 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 TUBA4BQ9H853 241 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 TMEM106BQ9NUM4 274 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 RSL24D1Q9UHA3 163 aaKnown RBP1.58□□□□□ -2.16
SCFD1-210ENST00000553693 FAM32AQ9Y421 112 aaKnown RBP1.58□□□□□ -2.16
SCFD1-210ENST00000553693 TIMM22Q9Y584 194 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 TIMM9Q9Y5J7 89 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 HSPE1-MOB4S4R3N1 261 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 HUWE1Q7Z6Z7 4374 aaKnown RBP1.58□□□□□ -2.16
SCFD1-210ENST00000553693 STAB2Q8WWQ8 2551 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 CSMD3Q7Z407 3707 aa1.58□□□□□ -2.16
SCFD1-210ENST00000553693 DNAH7Q8WXX0 4024 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 DOCK11Q5JSL3 2073 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 A8MT66 165 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 C17orf98A8MV24 154 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 BHLHE40O14503 412 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 LGALS3P17931 250 aaKnown RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 GZMHP20718 246 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 FKBP2P26885 142 aaKnown RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 PSMB8P28062 276 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 POLR2HP52434 150 aaKnown RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 EMP1P54849 157 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 RANP62826 216 aaKnown RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 TNFAIP6P98066 277 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 PRB3Q04118 309 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 GUK1Q16774 197 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 TNFAIP8L3Q5GJ75 292 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF705AQ6ZN79 300 aaPredicted RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 C3orf62Q6ZUJ4 267 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 SLC35E3Q7Z769 313 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 NDUFA11Q86Y39 141 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 STX12Q86Y82 276 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 CTAGE3PQ8IX95 158 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 OR6V1Q8N148 313 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 PACRGLQ8N7B6 248 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF283Q8N7M2 679 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 SLC30A7Q8NEW0 376 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 OR4C16Q8NGL9 310 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 OR5J2Q8NH18 312 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 C10orf82Q8WW14 230 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 ANP32BQ92688 251 aaKnown RBP1.57□□□□□ -2.16
SCFD1-210ENST00000553693 DCSTAMPQ9H295 470 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 CENPHQ9H3R5 247 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 XAGE1AQ9HD64 81 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 ENY2Q9NPA8 101 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 PKIGQ9Y2B9 76 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 PRELID3BQ9Y3B1 194 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 FRAS1Q86XX4 4008 aa1.57□□□□□ -2.16
SCFD1-210ENST00000553693 HERC1Q15751 4861 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 A0A087WUJ7 227 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 A0A087WUU8 490 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 A0A0J9YX75 114 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 SMIM9A6NGZ8 99 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 OR4C46A6NHA9 309 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 INMT-MINDY4F8WBC2 141 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 H3BUX3 64 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 PLA2G10O15496 165 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 PDE6DO43924 150 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 SMIM24O75264 130 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 UBL3O95164 117 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 C1QCP02747 245 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 TTRP02766 147 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 RBP1P09455 135 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 TFPTP0C1Z6 253 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 CCL1P22362 96 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 CD24P25063 80 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 XCL1P47992 114 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 GZMMP51124 257 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H4AP62805 103 aaKnown RBP1.56□□□□□ -2.16
SCFD1-210ENST00000553693 HBA1P69905 142 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 KCNJ8Q15842 424 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 MOGQ16653 247 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 C1orf140Q5VVS0 124 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 HACD4Q5VWC8 232 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 SPATA12Q7Z6I5 190 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 TMED4Q7Z7H5 227 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 LHFPL1Q86WI0 220 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 GPHB5Q86YW7 130 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 SBSPONQ8IVN8 264 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms