RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 REEP6Q96HR9 211 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 PGLYRP3Q96LB9 341 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 S100A13Q99584 98 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 NABP2Q9BQ15 211 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 TAPBPLQ9BX59 468 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 CDCA4Q9BXL8 241 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 SMCO4Q9NRQ5 59 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 PLEKHJ1Q9NW61 149 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 RASL12Q9NYN1 266 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 POMPQ9Y244 141 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF443Q9Y2A4 671 aaPredicted RBP2.33□□□□□ -2.04
LIMA1-205ENST00000550592 TRAV8-2A0A0B4J237 113 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 A0A0B4J2C4 111 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 TRAPPC13A5PLN9 417 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 GGTLC3B5MD39 225 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 H3BMM0 161 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 AZIN1O14977 448 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 NPFFO15130 113 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 EDF1O60869 148 aaKnown RBP2.32□□□□□ -2.04
LIMA1-205ENST00000550592 PROSCO94903 275 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 CNIH1O95406 144 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 MT-ND4LP03901 98 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 HTR1AP08908 422 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 SPNP16150 400 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 AKR1C4P17516 323 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 MYL12AP19105 171 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 TAS2R41P59536 307 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 NCS1P62166 190 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 RHEBQ15382 184 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 MMDQ15546 238 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 LRRC75BQ2VPJ9 315 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 SLC36A2Q495M3 483 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 PYDC2Q56P42 97 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF738Q8NE65 137 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 OR10X1Q8NGY0 326 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 EEF1AKMT1Q8WVE0 214 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 ASB13Q8WXK3 278 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 PTH2Q96A98 100 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 ROPN1LQ96C74 230 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 MRAP2Q96G30 205 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 TSPAN32Q96QS1 320 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 OR52B2Q96RD2 323 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 OR52E6Q96RD3 313 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 SIGMAR1Q99720 223 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 FAAP24Q9BTP7 215 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 EFCAB11Q9BUY7 163 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 PBDC1Q9BVG4 233 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 EBPLQ9BY08 206 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 PRO1933Q9H354 126 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.32□□□□□ -2.04
LIMA1-205ENST00000550592 VPS29Q9UBQ0 182 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
LIMA1-205ENST00000550592 A0A1B0GTI1 187 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 PPP5D1E7EU14 171 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 RAB36O95755 333 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 LGALS3P17931 250 aaKnown RBP2.31□□□□□ -2.04
LIMA1-205ENST00000550592 GZMHP20718 246 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 PYCR1P32322 319 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 TCTAP57738 103 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 RANP62826 216 aaKnown RBP2.31□□□□□ -2.04
LIMA1-205ENST00000550592 TNFAIP6P98066 277 aaPredicted RBP2.31□□□□□ -2.04
LIMA1-205ENST00000550592 DHRS2Q13268 280 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 SKP2Q13309 424 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 SURF2Q15527 256 aaPredicted RBP2.31□□□□□ -2.04
LIMA1-205ENST00000550592 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 OCIAD2Q56VL3 154 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 Q5VSD8 79 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 TCF24Q7RTU0 167 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 OLIG3Q7RTU3 272 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 VMO1Q7Z5L0 202 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 LYPD6Q86Y78 171 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 SNX29P2Q8IUI4 249 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 OR8D4Q8NGM9 314 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF675Q8TD23 568 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 C10orf82Q8WW14 230 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 IGF2BP2-AS1Q96M15 143 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 TP53RKQ96S44 253 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 MED28Q9H204 178 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 OR2D2Q9H210 308 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 TUBA4BQ9H853 241 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 LYRM2Q9NU23 88 aaPredicted RBP2.31□□□□□ -2.04
LIMA1-205ENST00000550592 RNF11Q9Y3C5 154 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 FAT4Q6V0I7 4981 aa2.31□□□□□ -2.04
LIMA1-205ENST00000550592 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 TRAV30A0A087WSZ9 112 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.3□□□□□ -2.04
LIMA1-205ENST00000550592 A0A0G2JND7 137 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 OR5H14A6NHG9 310 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 C8orf87E5RJ46 101 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 SYNGR2O43760 224 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 C1QCP02747 245 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 CST2P09228 141 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 CD79AP11912 226 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 CRHBPP24387 322 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 FKBP2P26885 142 aaKnown RBP2.3□□□□□ -2.04
LIMA1-205ENST00000550592 INPP1P49441 399 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 AKR1C2P52895 323 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 BLCAPP62952 87 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 HBA1P69905 142 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms