RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 CD300CQ08708 224 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 C12orf45Q8N5I9 185 aaPredicted RBP13.6□□□□□ -0.23
GATC-202ENST00000548171 VGLL1Q99990 258 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 MSRB1Q9NZV6 116 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 GSKIPQ9P0R6 139 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 SRRM2Q9UQ35 2752 aaKnown RBP13.6□□□□□ -0.23
GATC-202ENST00000548171 HHLA3Q9XRX5 114 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 PRELID1Q9Y255 219 aa13.6□□□□□ -0.23
GATC-202ENST00000548171 TRBV19A0A075B6N1 114 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 TRAV5A0A0B4J249 113 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 NAP1L6A6NFF2 107 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 GPX1P07203 203 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 CRISP2P16562 243 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 RNASE4P34096 147 aaKnown RBP13.59□□□□□ -0.23
GATC-202ENST00000548171 BTN1A1Q13410 526 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 AGPAT4-IT1Q9H0P7 198 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 FAT1Q14517 4588 aa13.59□□□□□ -0.23
GATC-202ENST00000548171 M0R3E3 92 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 IGHV3-53P01767 116 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 SMR3BP02814 79 aaPredicted RBP13.58□□□□□ -0.24
GATC-202ENST00000548171 EVI2AP22794 236 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 ERCC8Q13216 396 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 PDE6HQ13956 83 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 MIC13Q5XKP0 118 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
GATC-202ENST00000548171 L7N2F9 121 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 RGS13O14921 159 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 VAMP2P63027 116 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 C9orf47Q6ZRZ4 202 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 C8orf49Q96NF6 230 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 MRPL16Q9NX20 251 aaKnown RBP13.57□□□□□ -0.24
GATC-202ENST00000548171 TMEM14CQ9P0S9 112 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 FLVCR2Q9UPI3 526 aa13.57□□□□□ -0.24
GATC-202ENST00000548171 PRAF2O60831 178 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 MBPP02686 304 aaPredicted RBP13.56□□□□□ -0.24
GATC-202ENST00000548171 SRIP30626 198 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 INPP1P49441 399 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 FHL2Q14192 279 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 Q6ZSN1 163 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 ARPC5LQ9BPX5 153 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 WDR83OSQ9Y284 106 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 TIMM9Q9Y5J7 89 aa13.56□□□□□ -0.24
GATC-202ENST00000548171 IGHV1OR15-1A0A075B7D0 117 aa13.55□□□□□ -0.24
GATC-202ENST00000548171 NDUFB4O95168 129 aa13.55□□□□□ -0.24
GATC-202ENST00000548171 HIST1H1EP10412 219 aaKnown RBP13.55□□□□□ -0.24
GATC-202ENST00000548171 RPL29P47914 159 aaKnown RBP13.55□□□□□ -0.24
GATC-202ENST00000548171 TMEM70Q9BUB7 260 aa13.55□□□□□ -0.24
GATC-202ENST00000548171 MRPL32Q9BYC8 188 aaKnown RBP13.55□□□□□ -0.24
GATC-202ENST00000548171 SLC39A9Q9NUM3 307 aa13.55□□□□□ -0.24
GATC-202ENST00000548171 UQCC1Q9NVA1 299 aa13.55□□□□□ -0.24
GATC-202ENST00000548171 TP53TG3Q9ULZ0 132 aa13.55□□□□□ -0.24
GATC-202ENST00000548171 TMEM78Q5T7P6 136 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 IQCF2Q8IXL9 164 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 C10orf126Q8N4M7 172 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 ZFAND2AQ8N6M9 145 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 MITD1Q8WV92 249 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 C20orf85Q9H1P6 137 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 AAMDCQ9H7C9 122 aa13.54□□□□□ -0.24
GATC-202ENST00000548171 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 K7EQD1 137 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 VWC2Q2TAL6 325 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 SPANXN2Q5MJ10 180 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 WFDC10BQ8IUB3 73 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
GATC-202ENST00000548171 PCNPQ8WW12 178 aaKnown RBP13.53□□□□□ -0.24
GATC-202ENST00000548171 SRRQ9GZT4 340 aa13.53□□□□□ -0.24
GATC-202ENST00000548171 CST7O76096 145 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 ORM1P02763 201 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 BCAP31P51572 246 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 CAV2P51636 162 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 ZNF846Q147U1 533 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 TRIQKQ629K1 86 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 CHAC2Q8WUX2 184 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 MYCBP2O75592 4640 aa13.52□□□□□ -0.25
GATC-202ENST00000548171 IGLV5-52A0A0A0MRZ9 124 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 TRBV7-9A0A0J9YWB2 115 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 CENPXA8MT69 81 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 E5RGE8 158 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 CNPY1Q3B7I2 92 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 PRR9Q5T870 116 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 ZNF492Q9P255 531 aa13.51□□□□□ -0.25
GATC-202ENST00000548171 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
GATC-202ENST00000548171 J3QL48 77 aa13.5□□□□□ -0.25
GATC-202ENST00000548171 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
GATC-202ENST00000548171 CRYGDP07320 174 aa13.5□□□□□ -0.25
GATC-202ENST00000548171 BAXQ07812 192 aa13.5□□□□□ -0.25
GATC-202ENST00000548171 BLNKQ8WV28 456 aa13.5□□□□□ -0.25
GATC-202ENST00000548171 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
GATC-202ENST00000548171 UBE2L5PA0A1B0GUS4 154 aa13.49□□□□□ -0.25
GATC-202ENST00000548171 PYYP10082 97 aa13.49□□□□□ -0.25
GATC-202ENST00000548171 S100A11P31949 105 aa13.49□□□□□ -0.25
GATC-202ENST00000548171 OR10G4Q8NGN3 311 aa13.49□□□□□ -0.25
GATC-202ENST00000548171 LSM5Q9Y4Y9 91 aaKnown RBP13.49□□□□□ -0.25
GATC-202ENST00000548171 C9JCJ5 164 aa13.48□□□□□ -0.25
GATC-202ENST00000548171 PSCAO43653 123 aa13.48□□□□□ -0.25
GATC-202ENST00000548171 GYPEP15421 78 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms