RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153		Q6ZTC4	211 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	KCNRG	Q8N5I3	272 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	HYLS1	Q96M11	299 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	ODF3	Q96PU9	254 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	LYST	Q99698	3801 aa		10.27	□□□□□ -0.77
PTPN6-223	ENST00000545153	TRAV12-3	A0A0B4J271	114 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	ARL14EPL	P0DKL9	152 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	TAS2R60	P59551	318 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	TMEM78	Q5T7P6	136 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	FAM222A	Q5U5X8	452 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	TMEM256	Q8N2U0	113 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	RXFP4	Q8TDU9	374 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	ARPC5L	Q9BPX5	153 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	OTOR	Q9NRC9	128 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	DKK2	Q9UBU2	259 aa		10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.26	□□□□□ -0.77
PTPN6-223	ENST00000545153	C11orf94	C9JXX5	98 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153		H7BYZ3	331 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	SSX7	Q7RTT5	188 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	C2CD4C	Q8TF44	421 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	ST6GAL2	Q96JF0	529 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	FAM19A4	Q96LR4	140 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	C20orf144	Q9BQM9	153 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	DNAH1	Q9P2D7	4330 aa		10.25	□□□□□ -0.77
PTPN6-223	ENST00000545153	TRAV10	A0A0B4J240	114 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153		A0A0D9SG52	128 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	DIRC3	C9JPN6	131 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	SLC25A5	P05141	298 aa	Known RBP	10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	GCHFR	P30047	84 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	RNASE4	P34096	147 aa	Known RBP	10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF138	P52744	262 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	CD300C	Q08708	224 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF345	Q14585	488 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	FAM74A1	Q5RGS3	127 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	CMTM2	Q8TAZ6	248 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF492	Q9P255	531 aa		10.24	□□□□□ -0.77
PTPN6-223	ENST00000545153	DEFB131B	A0A096LNP1	70 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	IGLL5	B9A064	214 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	CXorf1	O96002	111 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	GPX1	P07203	203 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	BTN1A1	Q13410	526 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF726P1	Q15940	193 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	AKR1C8P	Q5T2L2	129 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	SUN5	Q8TC36	379 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	NIPSNAP3B	Q9BS92	247 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	RPH3AL	Q9UNE2	315 aa		10.23	□□□□□ -0.77
PTPN6-223	ENST00000545153	KANTR	A0A1W2PQU2	76 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	C7orf71	A4D174	169 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	RBAKDN	A6NC62	111 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	KLLN	B2CW77	178 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF324	O75467	553 aa	Predicted RBP	10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	CRISP2	P16562	243 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	TMUB2	Q71RG4	321 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	CCDC28A	Q8IWP9	274 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	IQCF2	Q8IXL9	164 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153		Q8TAT8	98 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF471	Q9BX82	626 aa	Predicted RBP	10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	TMEM167B	Q9NRX6	74 aa		10.22	□□□□□ -0.77
PTPN6-223	ENST00000545153	ALMS1	Q8TCU4	4167 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	hCG_2014768	A0A024R1R8	64 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	CTXND1	A0A1B0GTU2	59 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	TEX48	A0A1B0GUV7	120 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	PLAC8L1	A1L4L8	177 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	BCL2L11	O43521	198 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	NMB	P08949	121 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	GNG5	P63218	68 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZNF493	Q6ZR52	646 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	GOLT1A	Q6ZVE7	132 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	ZFAND2A	Q8N6M9	145 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	C16orf74	Q96GX8	76 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	TMPRSS5	Q9H3S3	457 aa		10.21	□□□□□ -0.77
PTPN6-223	ENST00000545153	LYRM9	A8MSI8	78 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	PFDN1	O60925	122 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	LY6G6C	O95867	125 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	DEFB130B	P0DP73	79 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	DEFB130A	P0DP74	79 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	FGF8	P55075	233 aa	Predicted RBP	10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	DAD1	P61803	113 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	SUMO1	P63165	101 aa	Known RBP	10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	PRR9	Q5T870	116 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153		Q6ZQT7	251 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	TCTE3	Q8IZS6	198 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	ARL6IP6	Q8N6S5	226 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	PYGO2	Q9BRQ0	406 aa		10.2	□□□□□ -0.78
PTPN6-223	ENST00000545153	HYDIN	Q4G0P3	5121 aa		10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	TRBV7-9	A0A0J9YWB2	115 aa		10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	SEC11B	P0C7V7	166 aa		10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	HTN3	P15516	51 aa		10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	RNASE8	Q8TDE3	154 aa	Known RBP	10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	TMEM263	Q8WUH6	116 aa	Known RBP	10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	NOP10	Q9NPE3	64 aa	Known RBP	10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	APLN	Q9ULZ1	77 aa		10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.19	□□□□□ -0.78
PTPN6-223	ENST00000545153	FHIT	P49789	147 aa		10.18	□□□□□ -0.78
PTPN6-223	ENST00000545153	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.18	□□□□□ -0.78
PTPN6-223	ENST00000545153	TMED6	Q8WW62	240 aa		10.18	□□□□□ -0.78
PTPN6-223	ENST00000545153	LINC00476	Q8WZB0	136 aa		10.18	□□□□□ -0.78
PTPN6-223	ENST00000545153	SGK494	Q96LW2	274 aa		10.18	□□□□□ -0.78
PTPN6-223	ENST00000545153	EPDR1	Q9UM22	224 aa		10.18	□□□□□ -0.78
PTPN6-223	ENST00000545153	IGHV4-4	A0A075B6R2	117 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms