RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 RAB24Q969Q5 203 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 LINC00477Q96M19 166 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 NIPSNAP3BQ9BS92 247 aa7.92□□□□□ -1.14
DDB1-222ENST00000543627 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
DDB1-222ENST00000543627 hCG_2014768A0A024R1R8 64 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 G3V3Q6 166 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 ARL14EPLP0DKL9 152 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 TAS2R60P59551 318 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 SERF2P84101 59 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 BTN1A1Q13410 526 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 FAM74A1Q5RGS3 127 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 PQLC2Q6ZP29 291 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 TMEM256Q8N2U0 113 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 Q8TAT8 98 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 GNPNAT1Q96EK6 184 aaPredicted RBP7.91□□□□□ -1.14
DDB1-222ENST00000543627 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
DDB1-222ENST00000543627 DKK2Q9UBU2 259 aa7.91□□□□□ -1.14
DDB1-222ENST00000543627 H7BYZ3 331 aa7.9□□□□□ -1.14
DDB1-222ENST00000543627 TAAR5O14804 337 aa7.9□□□□□ -1.14
DDB1-222ENST00000543627 CD300CQ08708 224 aa7.9□□□□□ -1.14
DDB1-222ENST00000543627 LYPD1Q8N2G4 141 aa7.9□□□□□ -1.14
DDB1-222ENST00000543627 NOP10Q9NPE3 64 aaKnown RBP7.9□□□□□ -1.14
DDB1-222ENST00000543627 OTORQ9NRC9 128 aa7.9□□□□□ -1.14
DDB1-222ENST00000543627 IGHV4-4A0A075B6R2 117 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 KANTRA0A1W2PQU2 76 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 C7orf71A4D174 169 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 DIRC3C9JPN6 131 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 SLC25A5P05141 298 aaKnown RBP7.89□□□□□ -1.15
DDB1-222ENST00000543627 GCHFRP30047 84 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 ZNF138P52744 262 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 FGF8P55075 233 aaPredicted RBP7.89□□□□□ -1.15
DDB1-222ENST00000543627 GNG5P63218 68 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 C9orf47Q6ZRZ4 202 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 GOLT1AQ6ZVE7 132 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 OR11H4Q8NGC9 324 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 RXFP4Q8TDU9 374 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 C16orf74Q96GX8 76 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 SGK494Q96LW2 274 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 ARPC5LQ9BPX5 153 aa7.89□□□□□ -1.15
DDB1-222ENST00000543627 TEX48A0A1B0GUV7 120 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 CBY3A6NI87 242 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 SNURFLB1AK76 121 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 RGS13O14921 159 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 PFDN1O60925 122 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 CXorf1O96002 111 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 STAG3L2P0CL84 134 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 STAG3L3P0CL85 134 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 SSX7Q7RTT5 188 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 LINC00476Q8WZB0 136 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 ODF3Q96PU9 254 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 C20orf144Q9BQM9 153 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 ZNF471Q9BX82 626 aaPredicted RBP7.88□□□□□ -1.15
DDB1-222ENST00000543627 CYTL1Q9NRR1 136 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
DDB1-222ENST00000543627 PLECQ15149 4684 aaKnown RBP7.88□□□□□ -1.15
DDB1-222ENST00000543627 RYR3Q15413 4870 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 A0A1B0GV50 99 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 UBE2G2P60604 165 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 SUMO1P63165 101 aaKnown RBP7.87□□□□□ -1.15
DDB1-222ENST00000543627 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 Q6ZQT7 251 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 KCNRGQ8N5I3 272 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 TMPRSS5Q9H3S3 457 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 NAGKQ9UJ70 344 aa7.87□□□□□ -1.15
DDB1-222ENST00000543627 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
DDB1-222ENST00000543627 TRAV8-1A0A0A6YYK1 113 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 A0A0D9SG52 128 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 CTXND1A0A1B0GTU2 59 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 GAGE12BA1L429 117 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 LYRM9A8MSI8 78 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 F5H768 121 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 GAGE7O76087 117 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 GAGE12FP0CL80 117 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 GAGE12GP0CL81 117 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 GAGE12IP0CL82 117 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 PRR9Q5T870 116 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 ZNF493Q6ZR52 646 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 TMEM263Q8WUH6 116 aaKnown RBP7.86□□□□□ -1.15
DDB1-222ENST00000543627 ST6GAL2Q96JF0 529 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 PYGO2Q9BRQ0 406 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 NDUFAF3Q9BU61 184 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 TMEM167BQ9NRX6 74 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 APLNQ9ULZ1 77 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 SACSQ9NZJ4 4579 aa7.86□□□□□ -1.15
DDB1-222ENST00000543627 DYNC2H1Q8NCM8 4307 aaKnown RBP7.85□□□□□ -1.15
DDB1-222ENST00000543627 HMSDA8MTL9 139 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 KLLNB2CW77 178 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 F6UZH7 168 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 IFNA7P01567 189 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 OR5I1Q13606 314 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 ZNF726P1Q15940 193 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 TMUB2Q71RG4 321 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 EIF4E3Q8N5X7 224 aaKnown RBP7.85□□□□□ -1.15
DDB1-222ENST00000543627 ZFAND2AQ8N6M9 145 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 RNASE8Q8TDE3 154 aaKnown RBP7.85□□□□□ -1.15
DDB1-222ENST00000543627 FAM19A4Q96LR4 140 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 GSN-AS1Q9NRJ2 163 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 TP53TG3Q9ULZ0 132 aa7.85□□□□□ -1.15
DDB1-222ENST00000543627 IGHV1OR15-1A0A075B7D0 117 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms