RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 FAM27E3Q08E93 113 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 BMPERQ8N8U9 685 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 SHISA9B4DS77 424 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 ZNF561-AS1K7EIQ3 104 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 Q6ZWC4 215 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 MST1P26927 711 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 SIGLEC9Q9Y336 463 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 BUB1B-PAK6H3BSN5 160 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 ZNF837Q96EG3 531 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-215ENST00000543185 PSCAO43653 123 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 FOXF2Q12947 444 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 WIPF2Q8TF74 440 aaPredicted RBP15.74■□□□□ 0.11
HDAC4-215ENST00000543185 PYGO2Q9BRQ0 406 aa15.74■□□□□ 0.11
HDAC4-215ENST00000543185 UBE2DNLQ8IWF7 75 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 TMEM200BQ69YZ2 307 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 PTPRBP23467 1997 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 PRSS47A8MTI9 375 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 CELA3AP09093 270 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 CEACAM8P31997 349 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-215ENST00000543185 YPEL3P61236 119 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-215ENST00000543185 ATP5G1P05496 136 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 Q8TAT8 98 aa15.73■□□□□ 0.11
HDAC4-215ENST00000543185 LYPD3O95274 346 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 FAM201AQ5SY85 155 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 C20orf204Q6ZNR8 217 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 IGKV1-27A0A075B6S5 117 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 IGHV3-73A0A0B4J1V6 119 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 ARMS2P0C7Q2 107 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 Q6ZVH6 145 aa15.72■□□□□ 0.11
HDAC4-215ENST00000543185 CTSBP07858 339 aa15.71■□□□□ 0.11
HDAC4-215ENST00000543185 KLRD1Q13241 179 aa15.71■□□□□ 0.11
HDAC4-215ENST00000543185 THAP8Q8NA92 274 aa15.71■□□□□ 0.11
HDAC4-215ENST00000543185 H3BMG7 143 aa15.71■□□□□ 0.1
HDAC4-215ENST00000543185 CFHR2P36980 270 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 HAMPP81172 84 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 CFHR1Q03591 330 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 IGHV1-18A0A0C4DH31 117 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 hADV29S1A0JD25 119 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 NTN3O00634 580 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-215ENST00000543185 C1orf43Q9BWL3 253 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 TMEM178BH3BS89 294 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 TECTAO75443 2155 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 A0A1W2PRX2 142 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 IGHV1-46P01743 117 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 RNF166Q96A37 237 aaPredicted RBP15.7■□□□□ 0.1
HDAC4-215ENST00000543185 E9PLN8 166 aa15.7■□□□□ 0.1
HDAC4-215ENST00000543185 IGHV2-70DA0A0C4DH43 119 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 NPYP01303 97 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 RNASE2P10153 161 aaKnown RBP15.69■□□□□ 0.1
HDAC4-215ENST00000543185 C9orf106Q8NAJ2 232 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 MORN5Q5VZ52 161 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 NDUFA12Q9UI09 145 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 DOPEY1Q5JWR5 2465 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 TGFBR3LH3BV60 316 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 ORMDL1Q9P0S3 153 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 V9GYV3 84 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 WDR87Q6ZQQ6 2873 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 SAP30O75446 220 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 RHOHQ15669 191 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 PNRC2Q9NPJ4 139 aaKnown RBP15.69■□□□□ 0.1
HDAC4-215ENST00000543185 C2CD3Q4AC94 2353 aa15.69■□□□□ 0.1
HDAC4-215ENST00000543185 SMKR1H3BMG3 65 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 IGKV1-12A0A0C4DH73 117 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 IGKV1D-12P01611 117 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 KIR2DL5BA0A0G2JN68 375 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 KIR2DL5BA0A0G2JPC4 375 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 SYNJ2BPP57105 145 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 KIR2DL5AQ8N109 375 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 A0A087WWL8 130 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 LINC00473A8K010 186 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 FUSP35637 526 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■■■□ 21.3
HDAC4-215ENST00000543185 FXYD7P58549 80 aa15.68■□□□□ 0.1
HDAC4-215ENST00000543185 BDP1A6H8Y1 2624 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 F6UB75 175 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 LCNL1Q6ZST4 164 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 IGFBPL1Q8WX77 278 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 J3QQQ9 107 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 IGHG2P01859 326 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 RMI2Q96E14 147 aa15.67■□□□□ 0.1
HDAC4-215ENST00000543185 ZNF493Q6ZR52 646 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 Q6P435 159 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 SMIM2Q9BVW6 85 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 SDHAF1A6NFY7 115 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 KLF5Q13887 457 aaPredicted RBP15.66■□□□□ 0.1
HDAC4-215ENST00000543185 HS3ST6Q96QI5 342 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 MRPL51Q4U2R6 128 aaKnown RBP15.66■□□□□ 0.1
HDAC4-215ENST00000543185 METRNQ9UJH8 293 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 IGLL1P15814 213 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 C15orf53Q8NAA6 179 aa15.66■□□□□ 0.1
HDAC4-215ENST00000543185 GATA3P23771 443 aa15.65■□□□□ 0.1
HDAC4-215ENST00000543185 GGNQ86UU5 652 aa15.65■□□□□ 0.1
HDAC4-215ENST00000543185 SIGLEC8Q9NYZ4 499 aa15.65■□□□□ 0.1
HDAC4-215ENST00000543185 CFHR4Q92496 578 aa15.65■□□□□ 0.1
HDAC4-215ENST00000543185 RNF114Q9Y508 228 aa15.65■□□□□ 0.1
HDAC4-215ENST00000543185 SELENOKQ9Y6D0 94 aa15.64■□□□□ 0.09
HDAC4-215ENST00000543185 TMEM243Q9BU79 118 aa15.64■□□□□ 0.09
HDAC4-215ENST00000543185 TRBV19A0A075B6N1 114 aa15.64■□□□□ 0.09
HDAC4-215ENST00000543185 KNCNA6PVL3 124 aa15.64■□□□□ 0.09
HDAC4-215ENST00000543185 CRYBA4P53673 196 aa15.64■□□□□ 0.09
HDAC4-215ENST00000543185 A0A087WV48 116 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms