RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 RGS10O43665 173 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 TNFAIP8O95379 198 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 PMP2P02689 132 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 FABP1P07148 127 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 CFC1P0CG37 223 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 CXCL3P19876 107 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 RNASE4P34096 147 aaKnown RBP1.92□□□□□ -2.1
CHD4-209ENST00000542717 AKR1C2P52895 323 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 UCP3P55916 312 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 TAS2R46P59540 309 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 SPCS3P61009 180 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 TSPAN5P62079 268 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 EIF5AP63241 154 aaKnown RBP1.92□□□□□ -2.1
CHD4-209ENST00000542717 CYCSP99999 105 aaKnown RBP1.92□□□□□ -2.1
CHD4-209ENST00000542717 ZNF90Q03938 601 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 BTN1A1Q13410 526 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 SS18Q15532 418 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 RHOHQ15669 191 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 GUK1Q16774 197 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 AARDQ4LEZ3 155 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 C2orf83Q53S99 150 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 C22orf42Q6IC83 251 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 LPCAT3Q6P1A2 487 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 ATRAIDQ6UW56 229 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 COX6B2Q6YFQ2 88 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 LINC00173Q6ZV60 143 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 PRSS3P2Q8NHM4 247 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 SUN5Q8TC36 379 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 LINC00477Q96M19 166 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 GPR82Q96P67 336 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 DUSP21Q9H596 190 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 AUNIPQ9H7T9 357 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 DIABLOQ9NR28 239 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 NDUFB11Q9NX14 153 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 TP53TG3Q9ULZ0 132 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 ANAPC10Q9UM13 185 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 TPRKBQ9Y3C4 175 aa1.92□□□□□ -2.1
CHD4-209ENST00000542717 IGKV1D-37A0A075B6S9 117 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 A0A087WWC5 75 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 A0A0G2JRQ6 117 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 FBLL1A6NHQ2 334 aaKnown RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 GABARAPH6UMI1 98 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 GABARAPO95166 117 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 SLC25A5P05141 298 aaKnown RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 S100A7P31151 101 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 RND3P61587 244 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 KLF9Q13886 244 aaPredicted RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 TRIM16LQ309B1 348 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 NMSQ5H8A3 153 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 TEPPQ6URK8 271 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 PRSS48Q7RTY5 328 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 FAM219AQ8IW50 185 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 LGI3Q8N145 548 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 C15orf54Q8N8G6 183 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 SLC25A29Q8N8R3 303 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 OR4D5Q8NGN0 318 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 OR5H6Q8NGV6 325 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 RNASE11Q8TAA1 199 aaKnown RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 TMEM170AQ8WVE7 144 aa1.91□□□□□ -2.1
CHD4-209ENST00000542717 HEYLQ9NQ87 328 aaPredicted RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 TXNL4BQ9NX01 149 aaKnown RBP1.91□□□□□ -2.1
CHD4-209ENST00000542717 A0A096LNI7 61 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 IGHV3-73A0A0B4J1V6 119 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 C3orf85A0A1B0GTC6 90 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 LINC00854A0A1B0GVQ3 168 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 C5orf51A6NDU8 294 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GAGE12JA6NER3 117 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 CEBPZOSA8MTT3 80 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 B3GALNT1O75752 331 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 CFDP00746 253 aaPredicted RBP1.9□□□□□ -2.11
CHD4-209ENST00000542717 ANGP03950 147 aaKnown RBP1.9□□□□□ -2.11
CHD4-209ENST00000542717 IGLV7-43P04211 117 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GPX1P07203 203 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 PGAM2P15259 253 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 RPL7P18124 248 aaKnown RBP1.9□□□□□ -2.11
CHD4-209ENST00000542717 ORM2P19652 201 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 RCVRNP35243 200 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GPX4P36969 197 aaPredicted RBP1.9□□□□□ -2.11
CHD4-209ENST00000542717 PIGPP57054 158 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GAGE1Q13065 139 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GAGE4Q13068 117 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GAGE5Q13069 117 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 SP6Q3SY56 376 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 GAGE13Q4V321 117 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 PRR27Q6MZM9 219 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 ENHOQ6UWT2 76 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 LYSMD2Q8IV50 215 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 LHFPL5Q8TAF8 219 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 TYMSOSQ8TAI1 123 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 RASL10AQ92737 203 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 ZNF486Q96H40 463 aaPredicted RBP1.9□□□□□ -2.11
CHD4-209ENST00000542717 TP53RKQ96S44 253 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 TRGV9Q99603 122 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 TMEM147Q9BVK8 224 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 C20orf85Q9H1P6 137 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
CHD4-209ENST00000542717 CACFD1Q9UGQ2 172 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms