RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 NRGNQ92686 78 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 TMEM191AQ9H0A3 160 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 HIF1ANQ9NWT6 349 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 IGHV7-81A0A0B4J1V7 117 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 C19orf84I3L1E1 186 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
PTPN1-202ENST00000541713 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
PTPN1-202ENST00000541713 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
PTPN1-202ENST00000541713 KLRB1Q12918 225 aa10.55□□□□□ -0.72
PTPN1-202ENST00000541713 C8orf31Q8N9H6 132 aa10.55□□□□□ -0.72
PTPN1-202ENST00000541713 NEU4Q8WWR8 484 aaPredicted RBP10.55□□□□□ -0.72
PTPN1-202ENST00000541713 THYN1Q9P016 225 aa10.55□□□□□ -0.72
PTPN1-202ENST00000541713 IGSF10Q6WRI0 2623 aa10.55□□□□□ -0.72
PTPN1-202ENST00000541713 F8W735 103 aaPredicted RBP10.55□□□□□ -0.72
PTPN1-202ENST00000541713 CCL25O15444 150 aa10.55□□□□□ -0.72
PTPN1-202ENST00000541713 ATP5L2Q7Z4Y8 100 aa10.55□□□□□ -0.72
PTPN1-202ENST00000541713 NPYP01303 97 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 IGF1P05019 195 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
PTPN1-202ENST00000541713 SLC25A34Q6PIV7 304 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 SIGLEC8Q9NYZ4 499 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 IGLV11-55A0A075B6I3 123 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 PVRIGQ6DKI7 326 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 SMAD5-AS1Q9Y6J3 95 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 JMJD1CQ15652 2540 aa10.54□□□□□ -0.72
PTPN1-202ENST00000541713 ACANP16112 2415 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 GNLYP22749 145 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 KLF5Q13887 457 aaPredicted RBP10.53□□□□□ -0.72
PTPN1-202ENST00000541713 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
PTPN1-202ENST00000541713 FAM162BQ5T6X4 162 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 PRR25Q96S07 402 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 RPL7P18124 248 aaKnown RBP10.53□□□□□ -0.72
PTPN1-202ENST00000541713 HIST2H2BDQ6DRA6 164 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 PIP4P2Q8N4L2 257 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 MSRB2Q9Y3D2 182 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 ANKRD17O75179 2603 aaKnown RBP10.53□□□□□ -0.72
PTPN1-202ENST00000541713 PRSS1P07477 247 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 ZFP30Q9Y2G7 519 aa10.53□□□□□ -0.72
PTPN1-202ENST00000541713 F6UB75 175 aa10.52□□□□□ -0.72
PTPN1-202ENST00000541713 TRBV12-3P01733 135 aa10.52□□□□□ -0.72
PTPN1-202ENST00000541713 PLP1P60201 277 aa10.52□□□□□ -0.72
PTPN1-202ENST00000541713 TRAV40A0A0B4J280 105 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 ANKRD39Q53RE8 183 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 OR11H6Q8NGC7 330 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 FBN2P35556 2912 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 RASL11AQ6T310 242 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 Q8N9W7 124 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.73
PTPN1-202ENST00000541713 HAX1O00165 279 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 NF1P21359 2839 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 CCDC144NLQ6NUI1 221 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 LY6G5BQ8NDX9 201 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 HSPB8Q9UJY1 196 aa10.51□□□□□ -0.73
PTPN1-202ENST00000541713 K7EP13 123 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 M0R381 172 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 KIR3DS1Q14943 382 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 C7orf71A4D174 169 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 ORMDL3Q8N138 153 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 WI2-2373I1.2A0A1W2PRP0 233 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 TRGV3P03979 118 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 S100A7P31151 101 aa10.5□□□□□ -0.73
PTPN1-202ENST00000541713 TMEM95Q3KNT9 176 aa10.49□□□□□ -0.73
PTPN1-202ENST00000541713 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
PTPN1-202ENST00000541713 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
PTPN1-202ENST00000541713 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
PTPN1-202ENST00000541713 ZNF747Q9BV97 191 aa10.49□□□□□ -0.73
PTPN1-202ENST00000541713 PF4V1P10720 104 aa10.49□□□□□ -0.73
PTPN1-202ENST00000541713 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
PTPN1-202ENST00000541713 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
PTPN1-202ENST00000541713 CHCHD1Q96BP2 118 aaKnown RBP10.49□□□□□ -0.73
PTPN1-202ENST00000541713 AGRNO00468 2067 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 H3BVH4 76 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 GOSR1O95249 250 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 FCER1GP30273 86 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 LEPP41159 167 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 FAM104BQ5XKR9 115 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 Q6ZS46 218 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 TRAV30A0A087WSZ9 112 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
PTPN1-202ENST00000541713 NDUFA3O95167 84 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 TEX15Q9BXT5 2789 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 EDN2P20800 178 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 CT83Q5H943 113 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 NPBQ8NG41 125 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 COX11Q9Y6N1 276 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 DOPEY1Q5JWR5 2465 aa10.48□□□□□ -0.73
PTPN1-202ENST00000541713 IGHG4P01861 327 aa10.47□□□□□ -0.73
PTPN1-202ENST00000541713 HTN1P15515 57 aa10.47□□□□□ -0.73
PTPN1-202ENST00000541713 BLCAPP62952 87 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms