RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 OR4C6Q8NH72 309 aa0.59□□□□□ -2.31
KNTC1-212ENST00000541466 SLC50A1Q9BRV3 221 aa0.59□□□□□ -2.31
KNTC1-212ENST00000541466 MRPS26Q9BYN8 205 aaKnown RBP0.59□□□□□ -2.31
KNTC1-212ENST00000541466 LINC00846Q9NV44 126 aa0.59□□□□□ -2.31
KNTC1-212ENST00000541466 SCN8AQ9UQD0 1980 aa0.59□□□□□ -2.32
KNTC1-212ENST00000541466 MYH7BA7E2Y1 1941 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 CEP192Q8TEP8 1941 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 IGKV1D-42A0A075B6H8 117 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 A0A0D9SG52 128 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 TGOLN2O43493 480 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 CLPSP04118 112 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 CALB1P05937 261 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 SPI1P17947 270 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 FKBP2P26885 142 aaKnown RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 ZNF93P35789 620 aaPredicted RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 TFF3Q07654 80 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 EIF3IQ13347 325 aaKnown RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 DEFB121Q5J5C9 76 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 Q6ZS49 121 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 ZNF826PQ6ZT77 177 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 CLVS1Q8IUQ0 354 aaPredicted RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 PFN4Q8NHR9 129 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 MRPL30Q8TCC3 161 aaKnown RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 DNAJC9Q8WXX5 260 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 CMTM6Q9NX76 183 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 KLK9Q9UKQ9 250 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 PDCD11Q14690 1871 aaKnown RBP0.58□□□□□ -2.32
KNTC1-212ENST00000541466 HEATR5BQ9P2D3 2071 aa0.58□□□□□ -2.32
KNTC1-212ENST00000541466 KCNK1O00180 336 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 HYPMO75409 117 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 HLA-DRB1P01911 266 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 CTSDP07339 412 aaPredicted RBP0.57□□□□□ -2.32
KNTC1-212ENST00000541466 OR5G3P0C626 314 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 ASAH2BP0C7U1 165 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 CRYGAP11844 174 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 COTL1Q14019 142 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 SPANXN5Q5MJ07 72 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 ALKAL1Q6UXT8 129 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 C20orf196Q8IYI0 205 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 C1orf158Q8N1D5 194 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 LINC00311Q8N616 119 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 OR5A1Q8NGJ0 315 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 OR13C4Q8NGS5 318 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 SLC35B4Q969S0 331 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 PTH2Q96A98 100 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 COMMD5Q9GZQ3 224 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 ACER3Q9NUN7 267 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 SPEF2Q9C093 1822 aa0.57□□□□□ -2.32
KNTC1-212ENST00000541466 KTN1Q86UP2 1357 aaKnown RBP0.57□□□□□ -2.32
KNTC1-212ENST00000541466 PQLC2LA1A4F0 135 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 PSMD12O00232 456 aaPredicted RBP0.56□□□□□ -2.32
KNTC1-212ENST00000541466 SPCS3P61009 180 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 PSME3P61289 254 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 HIST3H3Q16695 136 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 KHDC3LQ587J8 217 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 CCDC122Q5T0U0 273 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 C8orf74Q6P047 294 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 MIR17HGQ75NE6 70 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 LRRC25Q8N386 305 aaPredicted RBP0.56□□□□□ -2.32
KNTC1-212ENST00000541466 DDI1Q8WTU0 396 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 LINC00526Q96FQ7 95 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 TMEM147Q9BVK8 224 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 ULBP3Q9BZM4 244 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 MRPL40Q9NQ50 206 aaKnown RBP0.56□□□□□ -2.32
KNTC1-212ENST00000541466 PRTFDC1Q9NRG1 225 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 FBXL12Q9NXK8 326 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 ZFP30Q9Y2G7 519 aa0.56□□□□□ -2.32
KNTC1-212ENST00000541466 KIAA1549LQ6ZVL6 1849 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 MYO5AQ9Y4I1 1855 aaKnown RBP0.55□□□□□ -2.32
KNTC1-212ENST00000541466 TRAV9-1A0A075B6T8 112 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 LOC110117498A0A087WWA1 95 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 TGIF2-C20orf24A0A0A6YYL0 155 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 C2orf70A6NJV1 201 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 GOLGA6L19H0YKK7 550 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 OR1I1O60431 355 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 IGKV1-5P01602 117 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 SPRR2EP22531 72 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 SPRR2DP22532 72 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 SPRR2BP35325 72 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 SPRR2AP35326 72 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 RAB4BP61018 213 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 MAGOHP61326 146 aaKnown RBP0.55□□□□□ -2.32
KNTC1-212ENST00000541466 RHEBQ15382 184 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 CDKL4Q5MAI5 379 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 LPCAT3Q6P1A2 487 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 ANKRD29Q8N6D5 301 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 Q8N814 137 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 TERB2Q8NHR7 220 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 ISOC1Q96CN7 298 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 IMP4Q96G21 291 aaKnown RBP0.55□□□□□ -2.32
KNTC1-212ENST00000541466 OBSCN-AS1Q96MR7 158 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 OR52E6Q96RD3 313 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 NIPSNAP1Q9BPW8 284 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 MIXL1Q9H2W2 232 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 C11orf68Q9H3H3 251 aaKnown RBP0.55□□□□□ -2.32
KNTC1-212ENST00000541466 SLC39A9Q9NUM3 307 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 TP73-AS1Q9UF72 201 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 HEATR5AQ86XA9 2040 aa0.55□□□□□ -2.32
KNTC1-212ENST00000541466 MED12Q93074 2177 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms