RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 KLLNB2CW77 178 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 H3BQ15 152 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 RGS13O14921 159 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 PSCAO43653 123 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 CCNKO75909 580 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 SRIP30626 198 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 RNASE4P34096 147 aaKnown RBP8.33□□□□□ -1.08
SNHG1-216ENST00000541416 CAMLGP49069 296 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 CRYBA4P53673 196 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
SNHG1-216ENST00000541416 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
SNHG1-216ENST00000541416 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 TIMM9Q9Y5J7 89 aa8.33□□□□□ -1.08
SNHG1-216ENST00000541416 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 L7N2F9 121 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 PRAF2O60831 178 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 ORM1P02763 201 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 HIST1H1EP10412 219 aaKnown RBP8.32□□□□□ -1.08
SNHG1-216ENST00000541416 INPP1P49441 399 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 VAMP2P63027 116 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 BTN1A1Q13410 526 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 PDE6HQ13956 83 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 IAH1Q2TAA2 248 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-216ENST00000541416 TMEM78Q5T7P6 136 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 MGST2Q99735 147 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 TXNDC17Q9BRA2 123 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 MRPL32Q9BYC8 188 aaKnown RBP8.32□□□□□ -1.08
SNHG1-216ENST00000541416 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 BOLA1Q9Y3E2 137 aa8.32□□□□□ -1.08
SNHG1-216ENST00000541416 S100A5P33763 92 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 CD300CQ08708 224 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 ZNF415Q09FC8 603 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 MORN5Q5VZ52 161 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 NRARPQ7Z6K4 114 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 SRRQ9GZT4 340 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 MRPL16Q9NX20 251 aaKnown RBP8.31□□□□□ -1.08
SNHG1-216ENST00000541416 GSKIPQ9P0R6 139 aa8.31□□□□□ -1.08
SNHG1-216ENST00000541416 TRBV19A0A075B6N1 114 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 IGHV1OR15-1A0A075B7D0 117 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 NAP1L6A6NFF2 107 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 E5RGE8 158 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 CRYGDP07320 174 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 CRISP2P16562 243 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 ERCC8Q13216 396 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 FHL2Q14192 279 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 SH2D6Q7Z4S9 175 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 C20orf85Q9H1P6 137 aa8.3□□□□□ -1.08
SNHG1-216ENST00000541416 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-216ENST00000541416 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 C7orf66A4D0T2 115 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 C9JCJ5 164 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 K7EQD1 137 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 M0R3E3 92 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
SNHG1-216ENST00000541416 BCAP31P51572 246 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 ARL16Q0P5N6 197 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 ZNF846Q147U1 533 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 C9orf47Q6ZRZ4 202 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 WFDC10BQ8IUB3 73 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 IQCF2Q8IXL9 164 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 FAM19A4Q96LR4 140 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 AGPAT4-IT1Q9H0P7 198 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 UQCC1Q9NVA1 299 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 TMEM14CQ9P0S9 112 aa8.29□□□□□ -1.08
SNHG1-216ENST00000541416 CENPXA8MT69 81 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 NDUFB6O95139 128 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 GYPEP15421 78 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 RPL29P47914 159 aaKnown RBP8.28□□□□□ -1.08
SNHG1-216ENST00000541416 CAV2P51636 162 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 MIC13Q5XKP0 118 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 SLC39A9Q9NUM3 307 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 RCL1Q9Y2P8 373 aaKnown RBP8.28□□□□□ -1.08
SNHG1-216ENST00000541416 V9GYH0 126 aa8.28□□□□□ -1.08
SNHG1-216ENST00000541416 TRBV7-9A0A0J9YWB2 115 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 H3BMQ9 156 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 MBPP02686 304 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-216ENST00000541416 PVALBP20472 110 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-216ENST00000541416 BAXQ07812 192 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 CNPY1Q3B7I2 92 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 SPANXN2Q5MJ10 180 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 TRIQKQ629K1 86 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 OR10G4Q8NGN3 311 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 BLNKQ8WV28 456 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 SPXQ9BT56 116 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 GPN1Q9HCN4 374 aaPredicted RBP8.27□□□□□ -1.09
SNHG1-216ENST00000541416 TP53TG3Q9ULZ0 132 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 WDR83OSQ9Y284 106 aa8.27□□□□□ -1.09
SNHG1-216ENST00000541416 IGHV3-38A0A0C4DH36 116 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 CST7O76096 145 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 C1QBP02746 253 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 S100A11P31949 105 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 ZNF138P52744 262 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 HBG1P69891 147 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 HBG2P69892 147 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 HAMPP81172 84 aa8.26□□□□□ -1.09
SNHG1-216ENST00000541416 ZFAND2AQ8N6M9 145 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms