RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 RCHY1Q96PM5 261 aa5.4□□□□□ -1.54
LMO3-220ENST00000539232 ZNF586Q9NXT0 402 aa5.4□□□□□ -1.54
LMO3-220ENST00000539232 GNG13Q9P2W3 67 aa5.4□□□□□ -1.54
LMO3-220ENST00000539232 PEMTQ9UBM1 199 aa5.4□□□□□ -1.54
LMO3-220ENST00000539232 TRAPPC1Q9Y5R8 145 aa5.4□□□□□ -1.54
LMO3-220ENST00000539232 STARD9Q9P2P6 4700 aa5.4□□□□□ -1.55
LMO3-220ENST00000539232 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 IGKV1-17P01599 117 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 MT-ND6P03923 174 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 S100GP29377 79 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 MEF2BQ02080 365 aaPredicted RBP5.39□□□□□ -1.55
LMO3-220ENST00000539232 ID3Q02535 119 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 ADIRFQ15847 76 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 OCIAD2Q56VL3 154 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 ETFRF1Q6IPR1 90 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 LCN12Q6JVE5 192 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 OR5C1Q8NGR4 320 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 DYNLRB2Q8TF09 96 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 TMEM37Q8WXS4 190 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 RAB40CQ96S21 281 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 FAM110AQ9BQ89 295 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 TM2D3Q9BRN9 247 aa5.39□□□□□ -1.55
LMO3-220ENST00000539232 IGSF23A1L1A6 192 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 A8MZ25 164 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 INS-IGF2F8WCM5 200 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 HMGB3O15347 200 aaKnown RBP5.38□□□□□ -1.55
LMO3-220ENST00000539232 PDE6DO43924 150 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 TMEM50AO95807 157 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 IGLC2P0DOY2 106 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 IGLC3P0DOY3 106 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 MFAP4P55083 255 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 HBG1P69891 147 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 HBG2P69892 147 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 TIGITQ495A1 244 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 OR10J3Q5JRS4 329 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 TXN2Q99757 166 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 CST9LQ9H4G1 147 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 ZFAND3Q9H8U3 227 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.38□□□□□ -1.55
LMO3-220ENST00000539232 SMPXQ9UHP9 88 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 LY96Q9Y6Y9 160 aa5.38□□□□□ -1.55
LMO3-220ENST00000539232 IGKV3-7A0A075B6H7 116 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 FAM24AA6NFZ4 105 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 CEBPZOSA8MTT3 80 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 OR11H12B2RN74 326 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 C17orf112F2Z3M2 114 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 NDUFA4O00483 81 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 CHEK1O14757 476 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 ZNF253O75346 499 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 FCGR2BP31994 310 aaPredicted RBP5.37□□□□□ -1.55
LMO3-220ENST00000539232 TFPI2P48307 235 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 ERHP84090 104 aaKnown RBP5.37□□□□□ -1.55
LMO3-220ENST00000539232 BATFQ16520 125 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 FAM162BQ5T6X4 162 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 PRR27Q6MZM9 219 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 WDR73Q6P4I2 378 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 Q6ZN92 141 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 Q6ZWC4 215 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 TMEM217Q8N7C4 229 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 STPG4Q8N801 248 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 OR2K2Q8NGT1 345 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 OR52E5Q8NH55 327 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 RHPN1-AS1Q9BWJ2 59 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 DAZ1Q9NQZ3 744 aaKnown RBP5.37□□□□□ -1.55
LMO3-220ENST00000539232 TECRQ9NZ01 308 aaKnown RBP5.37□□□□□ -1.55
LMO3-220ENST00000539232 THYN1Q9P016 225 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 RPH3ALQ9UNE2 315 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 UFC1Q9Y3C8 167 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
LMO3-220ENST00000539232 CTXND1A0A1B0GTU2 59 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 A0A1B0GV50 99 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 ZFP92A6NM28 416 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 PRSS47A8MTI9 375 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 HYPMO75409 117 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 SMIM17P0DL12 118 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 IAPPP10997 89 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 CRISP2P16562 243 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 RHOBP62745 196 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 C2orf83Q53S99 150 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 NIT1Q86X76 327 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 APRG1Q8IVJ8 170 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 MTURNQ8N3F0 131 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 STPG3Q8N7X2 389 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 OR1L6Q8NGR2 347 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 NPIPB3Q92617 1050 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 PARLQ9H300 379 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 EDA2RQ9HAV5 297 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 HEYLQ9NQ87 328 aaPredicted RBP5.36□□□□□ -1.55
LMO3-220ENST00000539232 RPRMQ9NS64 109 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 SLC39A9Q9NUM3 307 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 SORL1Q92673 2214 aa5.36□□□□□ -1.55
LMO3-220ENST00000539232 IGKV1D-37A0A075B6S9 117 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 A0A1B0GV72 72 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 C15orf62A8K5M9 175 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms