RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 E5RGE8 158 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 K7EPK0 472 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 EVI2AP22794 236 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 CDKN1BP46527 198 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 ID3Q02535 119 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 HIST1H1AQ02539 215 aaPredicted RBP8.1□□□□□ -1.11
YBX3-207ENST00000539204 AARDQ4LEZ3 155 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 LYPD5Q6UWN5 251 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 RNF182Q8N6D2 247 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 ZNF738Q8NE65 137 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 SLC25A32Q9H2D1 315 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 C11orf1Q9H5F2 150 aa8.1□□□□□ -1.11
YBX3-207ENST00000539204 TRAV8-2A0A0B4J237 113 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 PITX3O75364 302 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 RAB14P61106 215 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 EIF5AP63241 154 aaKnown RBP8.09□□□□□ -1.11
YBX3-207ENST00000539204 FAM219AQ8IW50 185 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 Q8N814 137 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 OR8A1Q8NGG7 326 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 FAM210AQ96ND0 272 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 MED9Q9NWA0 146 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 ICOSQ9Y6W8 199 aa8.09□□□□□ -1.11
YBX3-207ENST00000539204 TRGV2A0A075B6R0 118 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 IGKV1D-37A0A075B6S9 117 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 PAX4O43316 350 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 RPL12P30050 165 aaKnown RBP8.08□□□□□ -1.12
YBX3-207ENST00000539204 S100A10P60903 97 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 PSG3Q16557 428 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 Q6ZTI0 123 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 GPR82Q96P67 336 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 C20orf144Q9BQM9 153 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 LINC00467Q9BRT7 94 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 CYTL1Q9NRR1 136 aa8.08□□□□□ -1.12
YBX3-207ENST00000539204 ZNF324O75467 553 aaPredicted RBP8.07□□□□□ -1.12
YBX3-207ENST00000539204 PVALBP20472 110 aaPredicted RBP8.07□□□□□ -1.12
YBX3-207ENST00000539204 GPX4P36969 197 aaPredicted RBP8.07□□□□□ -1.12
YBX3-207ENST00000539204 DAZ2Q13117 558 aaKnown RBP8.07□□□□□ -1.12
YBX3-207ENST00000539204 LRRC20Q8TCA0 184 aa8.07□□□□□ -1.12
YBX3-207ENST00000539204 SLC35E1Q96K37 410 aa8.07□□□□□ -1.12
YBX3-207ENST00000539204 ZNF471Q9BX82 626 aaPredicted RBP8.07□□□□□ -1.12
YBX3-207ENST00000539204 LSM5Q9Y4Y9 91 aaKnown RBP8.07□□□□□ -1.12
YBX3-207ENST00000539204 TPT1P13693 172 aaKnown RBP8.06□□□□□ -1.12
YBX3-207ENST00000539204 S100A7P31151 101 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 MRPL23Q16540 153 aaKnown RBP8.06□□□□□ -1.12
YBX3-207ENST00000539204 Q6ZSA8 131 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 C10orf126Q8N4M7 172 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 ARV1Q9H2C2 271 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 CACNG5Q9UF02 275 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 CACFD1Q9UGQ2 172 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 SLC45A2Q9UMX9 530 aa8.06□□□□□ -1.12
YBX3-207ENST00000539204 RCL1Q9Y2P8 373 aaKnown RBP8.06□□□□□ -1.12
YBX3-207ENST00000539204 SCGB1D2O95969 90 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 CRYGDP07320 174 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 NMBP08949 121 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 TAS2R30P59541 319 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
YBX3-207ENST00000539204 ALKAL2Q6UX46 152 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 NEGR1Q7Z3B1 354 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 TRGV9Q99603 122 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 SLC25A31Q9H0C2 315 aa8.05□□□□□ -1.12
YBX3-207ENST00000539204 ORM2P19652 201 aa8.04□□□□□ -1.12
YBX3-207ENST00000539204 ATP5IP56385 69 aaPredicted RBP8.04□□□□□ -1.12
YBX3-207ENST00000539204 SLAQ13239 276 aa8.04□□□□□ -1.12
YBX3-207ENST00000539204 KIR3DS1Q14943 382 aa8.04□□□□□ -1.12
YBX3-207ENST00000539204 EIF5AL1Q6IS14 154 aaKnown RBP8.04□□□□□ -1.12
YBX3-207ENST00000539204 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
YBX3-207ENST00000539204 SMIM8Q96KF7 97 aa8.04□□□□□ -1.12
YBX3-207ENST00000539204 LYRM2Q9NU23 88 aaPredicted RBP8.04□□□□□ -1.12
YBX3-207ENST00000539204 BORCS7-ASMTA0A0B4J1R7 106 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 TRAV5A0A0B4J249 113 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 MED6O75586 246 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 POLR2GP62487 172 aaKnown RBP eCLIP8.03□□□□□ -1.12
YBX3-207ENST00000539204 VAMP2P63027 116 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 BAXQ07812 192 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 EIF4E3Q8N5X7 224 aaKnown RBP8.03□□□□□ -1.12
YBX3-207ENST00000539204 TMEM252Q8N6L7 170 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 RPUSD4Q96CM3 377 aaKnown RBP8.03□□□□□ -1.12
YBX3-207ENST00000539204 PRO0255Q9UI72 69 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 FUT9Q9Y231 359 aa8.03□□□□□ -1.12
YBX3-207ENST00000539204 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.12
YBX3-207ENST00000539204 TRGV1A0A0A0MS02 117 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 WRBO00258 174 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 RS1O15537 224 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 SYNGR2O43760 224 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
YBX3-207ENST00000539204 GFI1BQ5VTD9 330 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 RPL7L1Q6DKI1 246 aaKnown RBP8.02□□□□□ -1.13
YBX3-207ENST00000539204 SCXQ7RTU7 201 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 DTD1Q8TEA8 209 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 SAT2Q96F10 170 aaPredicted RBP8.02□□□□□ -1.13
YBX3-207ENST00000539204 TMEM147Q9BVK8 224 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 HSPB7Q9UBY9 170 aa8.02□□□□□ -1.13
YBX3-207ENST00000539204 IGSF23A1L1A6 192 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 FAM24AA6NFZ4 105 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 SEC11BP0C7V7 166 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms